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Sample GSM549336 Query DataSets for GSM549336
Status Public on Aug 11, 2010
Title WB-Still-1936
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 54
gender: Male
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 2.878979 0.2924901
ILMN_1660305 123.4388 0
ILMN_1792173 140.1306 0
ILMN_1762337 -4.489971 0.6693017
ILMN_2055271 21.58137 0.02108037
ILMN_1736007 7.452048 0.1501976
ILMN_1814316 0.2175516 0.4176548
ILMN_2359168 -1.711437 0.5177866
ILMN_1731507 -3.670809 0.6284585
ILMN_1787689 -1.730018 0.5177866
ILMN_1745607 -11.27018 0.942029
ILMN_2136495 0.899645 0.3754941
ILMN_1668111 -12.82496 0.969697
ILMN_2295559 -0.148781 0.4347826
ILMN_1735045 -4.536061 0.6719368
ILMN_1680754 -8.414044 0.8656126
ILMN_2375184 -3.970176 0.6429513
ILMN_1659452 4.963065 0.2187088
ILMN_1767388 3.676091 0.2621871
ILMN_1675204 -4.177236 0.6521739

Total number of rows: 48803

Table truncated, full table size 1487 Kbytes.




Supplementary file Size Download File type/resource
GSM549336_4424548045_G_Raw.txt.gz 528.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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