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Sample GSM30985 Query DataSets for GSM30985
Status Public on Sep 30, 2004
Title F1#68 U34C
Sample type RNA
 
Source name Heart, Left Ventricle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description RNA was extracted from the left ventricle of the heart, taken from a single 15 week old inbred rat that was maintained under specific pathogen free conditions. Target cRNA was prepared using the Enzo Bioarray High Yield RNA Transcript Labeling Kit (Enzo Diagnostics, Farmingdale, NY), purified on a column (Rneasy mini kit, Qiagen), and hybridized to commercially available Affymetrix rat GeneChips arrays according to protocols recommended by the manufacturers. Data was analyzed using the GeneChip Expression Analysis Software (Affymetrix).
Keywords = quantitative real-time RT-PCR
Keywords = insulin receptor substrate 2 (Irs2)
Keywords = phosphatidylinositol 3-kinase
Keywords = regulatory subunit 1
Keywords = (Pik3r1)
Keywords = endurance running
Keywords = treadmill running
 
Submission date Sep 24, 2004
Last update date May 27, 2005
Contact name Justin A. Ways
E-mail(s) [email protected]
Phone 419-383-4150
Organization name Medical College of Ohio
Department Physiology and Cardiovascular Genomics
Street address 3035 Arlington Ave.
City Toledo
State/province OH
ZIP/Postal code 43614
Country USA
 
Platform ID GPL87
Series (1)
GSE1795 Expression Profiling of DA, COP, and F1(COPxDA) rat left ventricles

Data table header descriptions
ID_REF
VALUE normalized signal representing quantity of transcript
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE measure of the significance of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 6.2 A 0.852061
AFFX-MurIL10_at 4.6 A 0.724854
AFFX-MurIL4_at 1.1 A 0.969024
AFFX-MurFAS_at 2.3 A 0.631562
AFFX-BioB-5_at 147.6 P 0.020022
AFFX-BioB-M_at 234.7 P 0.000662
AFFX-BioB-3_at 130.2 P 0.028457
AFFX-BioC-5_at 465.1 P 0.000195
AFFX-BioC-3_at 328.8 P 0.000127
AFFX-BioDn-5_at 489.9 P 0.001102
AFFX-BioDn-3_at 2615.5 P 0.000147
AFFX-CreX-5_at 5917.3 P 0.000044
AFFX-CreX-3_at 6934.7 P 0.000044
AFFX-BioB-5_st 34 A 0.300606
AFFX-BioB-M_st 11.9 A 0.843268
AFFX-BioB-3_st 13.3 A 0.904333
AFFX-BioC-5_st 9.1 A 0.883887
AFFX-BioC-3_st 2.3 A 0.9273
AFFX-BioDn-5_st 15.7 A 0.300606
AFFX-BioDn-3_st 83.1 A 0.062929

Total number of rows: 8789

Table truncated, full table size 265 Kbytes.




Supplementary data files not provided

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