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GEO accession:
Sample GSM257172
Query DataSets for GSM257172
Status
Public on Jan 16, 2008
Title
Skin_Tcfap2c Mutant E16.5_rep2
Sample type
RNA
Source name
mouse skin, Tcfap2c mutant
Organism
Mus musculus
Characteristics
Skin removed from back region of embryonic day 16.5 mouse, Tcfap2c mutation
Biomaterial provider
Quinton Winger
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy kit using manufacturer's instructions
Label
biotin
Label protocol
Affymetrix kits/protocol
Hybridization protocol
Affymetrix protocols
Scan protocol
Affymetrix Scanner
Description
Mouse Skin from embryonic stage E16.5 with Tcfap2c mutation
Data processing
MAS5.0
Submission date
Jan 14, 2008
Last update date
Aug 28, 2018
Contact name
Jill Guttormsen
E-mail(s)
[email protected]
Phone
435-797-5486
Organization name
Utah State University
Department
ADVS
Lab
Winger Lab
Street address
5600 Old Main Hill
City
Logan
State/province
UT
ZIP/Postal code
84322
Country
USA
Platform ID
GPL1261
Series (1)
GSE10175
Comparison of gene expression in the epidermis of Tcfap2c mutant and control skin at embryonic day 16.5
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
VALUE
ABS_CALL
ABS_CALL
DETECTION P-VALUE
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
407.381
P
0.000445901
AFFX-BioB-M_at
570.771
P
4.42873e-05
AFFX-BioB-3_at
404.952
P
0.000340305
AFFX-BioC-5_at
1519.48
P
4.42873e-05
AFFX-BioC-3_at
1458.19
P
4.42873e-05
AFFX-BioDn-5_at
2358.35
P
4.42873e-05
AFFX-BioDn-3_at
5453.53
P
4.42873e-05
AFFX-CreX-5_at
13957.7
P
5.16732e-05
AFFX-CreX-3_at
18866.1
P
4.42873e-05
AFFX-DapX-5_at
294.579
P
0.000296708
AFFX-DapX-M_at
615.616
P
0.000856509
AFFX-DapX-3_at
976.726
P
7.00668e-05
AFFX-LysX-5_at
46.8175
M
0.0629293
AFFX-LysX-M_at
79.0901
A
0.0894781
AFFX-LysX-3_at
214.23
P
0.0032123
AFFX-PheX-5_at
63.2745
M
0.0584438
AFFX-PheX-M_at
89.2482
A
0.0780018
AFFX-PheX-3_at
159.391
P
0.00359458
AFFX-ThrX-5_at
89.7755
A
0.123572
AFFX-ThrX-M_at
118.347
P
0.000389797
Total number of rows:
45101
Table truncated, full table size
1379 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM257172.CEL.gz
3.7 Mb
(ftp)
(http)
CEL
GSM257172.CHP.gz
242.0 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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