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GEO accession:
Sample GSM230913
Query DataSets for GSM230913
Status
Public on Sep 22, 2007
Title
Human epidermal keratinocytes treated controls 48 hr
Sample type
RNA
Source name
Cultured epidermal keratinocytes
Organism
Homo sapiens
Characteristics
Grown in Rheinwald medium, switched to KBM for 24 hrs and another 48 hrs
Treatment protocol
Untreated control, 1hr
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Affymetrix standard
Label
Affymetrix standard
Label protocol
Affymetrix standard
Hybridization protocol
Affymetrix standard
Scan protocol
Affymetrix standard
Description
None
Data processing
Mas5.0
Submission date
Sep 20, 2007
Last update date
Aug 14, 2011
Contact name
Miroslav Blumenberg
E-mail(s)
[email protected]
Phone
212 263-5924
Organization name
NYU School of Medicine
Department
Dermatology
Lab
Blumenberg
Street address
455 First Ave #874
City
New York
State/province
NY
ZIP/Postal code
10016
Country
USA
Platform ID
GPL571
Series (1)
GSE9120
IL-1 treatment of human epidermal keratinocytes
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensities
ABS_CALL
present or absent
DETECTION P-VALUE
abs call p value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
685.37
P
0.000662269
AFFX-BioB-M_at
865.779
P
0.000224668
AFFX-BioB-3_at
683.433
P
0.000296708
AFFX-BioC-5_at
2634.36
P
4.42873e-05
AFFX-BioC-3_at
2737.37
P
4.42873e-05
AFFX-BioDn-5_at
4706.04
P
4.42873e-05
AFFX-BioDn-3_at
7368.6
P
4.42873e-05
AFFX-CreX-5_at
19049.8
P
4.42873e-05
AFFX-CreX-3_at
20755.3
P
4.42873e-05
AFFX-DapX-5_at
5.76553
A
0.749223
AFFX-DapX-M_at
61.3594
A
0.52976
AFFX-DapX-3_at
21.0893
A
0.843268
AFFX-LysX-5_at
3.69788
A
0.92207
AFFX-LysX-M_at
52.2312
A
0.48511
AFFX-LysX-3_at
11.1804
A
0.574038
AFFX-PheX-5_at
5.09734
A
0.891021
AFFX-PheX-M_at
2.73948
A
0.916426
AFFX-PheX-3_at
27.7577
A
0.852061
AFFX-ThrX-5_at
4.20386
A
0.949771
AFFX-ThrX-M_at
9.68789
A
0.932339
Total number of rows:
22277
Table truncated, full table size
667 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM230913.CEL.gz
1.6 Mb
(ftp)
(http)
CEL
GSM230913.CHP.gz
442.3 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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