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Sample GSM1701071 Query DataSets for GSM1701071
Status Public on Sep 29, 2015
Title patient6_STIC
Sample type RNA
 
Source name STIC (serous tubal intraepithelial carcinoma)
Organism Homo sapiens
Characteristics patient no.: patient 6
tissue: LCM from cryosection (STIC)
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description LCM from cryosection (STIC)
Data processing Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jun 01, 2015
Last update date Sep 29, 2015
Contact name Frank McKeon
E-mail(s) [email protected]
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE69429 Molecular analysis of normal oviduct, STIC and invasive serous cancer

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 6.10679
2672712 6.00144
2842570 4.20664
3526544 4.1715
2902531 4.56783
2402942 6.11366
3382216 4.71457
3771800 5.77902
2427469 4.60707
2392945 5.41095
2453006 4.51131
3552083 5.09646
3416651 4.60495
2562821 6.80449
3721851 5.67458
3442176 6.75371
2477438 3.91584
2926969 4.35749
3026969 5.42604
3796335 5.0483

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1701071_patient6_STIC.CEL.gz 21.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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