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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 29, 2015 |
| Title |
patient5_normal |
| Sample type |
RNA |
| |
|
| Source name |
normal oviduct
|
| Organism |
Homo sapiens |
| Characteristics |
patient no.: patient 5
tissue: LCM from cryosection (normal oviduct)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PicoPure® RNA Isolation Kit (Life Technologies)
|
| Label |
Biotin
|
| Label protocol |
Encore® Biotin Module (Nugen)
|
| |
|
| Hybridization protocol |
GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
|
| Scan protocol |
GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
|
| Description |
LCM from cryosection (normal oviduct)
|
| Data processing |
Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
|
| |
|
| Submission date |
Jun 01, 2015 |
| Last update date |
Sep 29, 2015 |
| Contact name |
Frank McKeon |
| E-mail(s) |
[email protected]
|
| Phone |
8608372486
|
| Organization name |
University of Houston
|
| Department |
Biology and Biochemistry
|
| Street address |
3455 Cullen Blvd
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77004 |
| Country |
USA |
| |
|
| Platform ID |
GPL5175 |
| Series (1) |
| GSE69429 |
Molecular analysis of normal oviduct, STIC and invasive serous cancer |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
signal intensity (log2 value) RMA |
| Data table |
| ID_REF |
VALUE |
| 3881686 |
5.37891 |
| 2672712 |
6.1517 |
| 2842570 |
4.37049 |
| 3526544 |
3.62089 |
| 2902531 |
4.72125 |
| 2402942 |
5.97301 |
| 3382216 |
4.4775 |
| 3771800 |
5.8139 |
| 2427469 |
3.52725 |
| 2392945 |
6.09991 |
| 2453006 |
4.99905 |
| 3552083 |
5.22465 |
| 3416651 |
4.44977 |
| 2562821 |
6.39979 |
| 3721851 |
5.35145 |
| 3442176 |
5.31526 |
| 2477438 |
3.90465 |
| 2926969 |
3.7313 |
| 3026969 |
5.14258 |
| 3796335 |
5.10712 |
Total number of rows: 22011
Table truncated, full table size 341 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM1701067_patient5_normal.CEL.gz |
21.2 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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