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Sample GSM1701060 Query DataSets for GSM1701060
Status Public on Sep 29, 2015
Title patient3_invasive_SC
Sample type RNA
 
Source name invasive serous ovarian cancer
Organism Homo sapiens
Characteristics patient no.: patient 3
tissue: LCM from cryosection (invasive SC)
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description LCM from cryosection (invasive SC)
Data processing Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jun 01, 2015
Last update date Sep 29, 2015
Contact name Frank McKeon
E-mail(s) [email protected]
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE69429 Molecular analysis of normal oviduct, STIC and invasive serous cancer

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 5.87344
2672712 6.24521
2842570 4.76681
3526544 3.82738
2902531 4.46774
2402942 5.90672
3382216 5.12608
3771800 5.6445
2427469 4.72225
2392945 6.11615
2453006 4.4522
3552083 4.90105
3416651 4.41429
2562821 6.4915
3721851 5.96423
3442176 6.74309
2477438 3.82949
2926969 3.84188
3026969 5.63788
3796335 5.06043

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1701060_patient3_invasive_SC.CEL.gz 20.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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