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Sample GSM1701054 Query DataSets for GSM1701054
Status Public on Sep 29, 2015
Title patient1_invasive_SC
Sample type RNA
 
Source name invasive serous ovarian cancer
Organism Homo sapiens
Characteristics patient no.: patient 1
tissue: LCM from cryosection (invasive SC)
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description LCM from cryosection (invasive SC)
Data processing Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jun 01, 2015
Last update date Sep 29, 2015
Contact name Frank McKeon
E-mail(s) [email protected]
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE69429 Molecular analysis of normal oviduct, STIC and invasive serous cancer

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 6.17016
2672712 6.8638
2842570 4.77397
3526544 3.25354
2902531 4.31681
2402942 6.21816
3382216 3.97026
3771800 6.31386
2427469 4.39266
2392945 5.61932
2453006 4.2877
3552083 5.17184
3416651 4.28856
2562821 7.03705
3721851 6.00944
3442176 6.48368
2477438 3.31737
2926969 3.51113
3026969 5.77632
3796335 4.7591

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1701054_patient1_invasive_SC.CEL.gz 20.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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