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Sample GSM1656382 Query DataSets for GSM1656382
Status Public on Apr 14, 2015
Title LD-3
Sample type RNA
 
Source name serum form LD SCLC patient
Organism Homo sapiens
Characteristics gender: male
age: 56y
subject status: small cell lung cancer (SCLC) patient
Stage: limited-stage
tissue: patient's serum
Treatment protocol All serum was collected before any treatment
Growth protocol Patients' blood were collected and seperated in 4hours.
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol following manufacturer's instructions
Label Cy3
Label protocol 200ng of total RNA were used to fellow expriment follow miRNA Complete Labeling and Hyb Kit (Agilent) protocol.
 
Hybridization protocol Follow miRNA Complete Labeling and Hyb Kit (Agilent) protocol.
Scan protocol Scanned on an Agilent G2565CA scanner.
Description miRNAs expression before treatment
050
Data processing Agilent Feature Extraction(v10.7)was used for background subtraction and Agilent GeneSpring was used to normalization.
 
Submission date Apr 13, 2015
Last update date Apr 14, 2015
Contact name Rui Zhou
E-mail(s) [email protected]
Phone +8613971523840
Organization name Wuhan Union Hospital
Department Cancer Center
Street address 湖北省武汉市江汉区唐家墩156号
City Wuhan
State/province Hubei
ZIP/Postal code 430023
Country China
 
Platform ID GPL16543
Series (1)
GSE67804 miRNAs related to metastasis of Small Cell Lung Cancer

Data table header descriptions
ID_REF
VALUE normalized value of 90 percentile (log2)

Data table
ID_REF VALUE
Blank -6.9671135
NC1_00000197 -6.9671135
NC1_00000215 -6.9671135
NC2_00079215 -6.9671135
NC2_00092197 -6.9671135
NC2_00106057 -6.9671135
NC2_00122731 -6.9671135
NegativeControl -6.9671135
bkv-miR-B1-3p -6.9671135
bkv-miR-B1-5p -6.9671135
dmr_285 5.3405275
dmr_3 9.293452
dmr_308 -6.9671135
dmr_316 -6.9671135
dmr_31a 5.4679213
dmr_6 8.445843
ebv-miR-BART1-3p -6.9671135
ebv-miR-BART1-5p -6.9671135
ebv-miR-BART10 -6.9671135
ebv-miR-BART10* -6.9671135

Total number of rows: 2029

Table truncated, full table size 50 Kbytes.




Supplementary file Size Download File type/resource
GSM1656382_US10313827_253816610062_S01_miRNA_107_Sep09_2_3.txt.gz 8.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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