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Platform GPL16543 Query DataSets for GPL16543
Status Public on Aug 01, 2014
Title Agilent-038166 cbc_human_miR18.0
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Arrays of this design have barcodes that begin with 16038166 or 2538166.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
 
Submission date Jan 24, 2013
Last update date Aug 01, 2014
Contact name Jiagen Li
E-mail(s) [email protected]
Organization name Cancer Institute, CAMS
Street address 17 Panjiayuannanli Chaoyang District
City Beijing
ZIP/Postal code 100021
Country China
 
Samples (270) GSM1069774, GSM1069775, GSM1069776, GSM1069777, GSM1069778, GSM1069779 
Series (5)
GSE43732 MiRNA Expression Profile Study Reveals a Prognostic Signature for Esophageal Squamous Cell Carcinoma
GSE67804 miRNAs related to metastasis of Small Cell Lung Cancer
GSE72274 Altered microRNA profiles in cumulus cells isolated from PCOS patients

Data table header descriptions
ID
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GENE_SYMBOL Gene Symbol
miRNA_ID Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location

Data table
ID SPOT_ID CONTROL_TYPE GENE_SYMBOL miRNA_ID ACCESSION_STRING CHROMOSOMAL_LOCATION
Blank --Blank pos
NC1_00000197 --NC1_00000197 neg
NC1_00000215 --NC1_00000215 neg
NC2_00079215 --NC2_00079215 neg
NC2_00092197 --NC2_00092197 neg
NC2_00106057 --NC2_00106057 neg
NC2_00122731 --NC2_00122731 neg
NegativeControl --NegativeControl neg
bkv-miR-B1-3p A_25_P00015346 FALSE bkv-miR-B1-3p bkv-miR-B1-3p mir|bkv-miR-B1-3p|mir|MIMAT0009150 unmapped
bkv-miR-B1-5p A_25_P00015342 FALSE bkv-miR-B1-5p bkv-miR-B1-5p mir|bkv-miR-B1-5p|mir|MIMAT0009149 unmapped
dmr_285 --dmr_285 pos
dmr_3 --dmr_3 pos
dmr_308 --dmr_308 pos
dmr_316 --dmr_316 pos
dmr_31a --dmr_31a pos
dmr_6 --dmr_6 pos
ebv-miR-BART1-3p A_25_P00013720 FALSE ebv-miR-BART1-3p ebv-miR-BART1-3p mir|ebv-miR-BART1-3p|mir|MIMAT0003390 HHV507799:000139393-000139408
ebv-miR-BART1-5p A_25_P00013716 FALSE ebv-miR-BART1-5p ebv-miR-BART1-5p mir|ebv-miR-BART1-5p|mir|MIMAT0000999 HHV507799:000139362-000139374
ebv-miR-BART10 A_25_P00011669 FALSE ebv-miR-BART10 ebv-miR-BART10 mir|ebv-miR-BART10|mir|MIMAT0003420|mir|ebv-miR-BART10_v9.1|mir|MIMAT0003420 HHV507799:000147363-000147378,HHV507799:000147363-000147378
ebv-miR-BART10* A_25_P00013808 FALSE ebv-miR-BART10* ebv-miR-BART10* mir|ebv-miR-BART10*|mir|MIMAT0004817 HHV507799:000147324-000147342

Total number of rows: 2029

Table truncated, full table size 289 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL16543_038166_D_GEO_20120111_lijiagen.txt.gz 2.1 Mb (ftp)(http) TXT

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