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Sample GSM13185 Query DataSets for GSM13185
Status Public on Dec 04, 2003
Title Colon 3C
Sample type RNA
 
Source name Whole segment, colon, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) [email protected]
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL83
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_C3_ADI nat. log transformed MAS5 data
LN_C3_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_C3_ADI LN_C3_ADI_Norm
AFFX-MurIL2_at 61.7 4.122 4.214
AFFX-MurIL10_at 145.8 4.982 5.026
AFFX-MurIL4_at 76.6 4.339 4.423
AFFX-MurFAS_at 357.2 5.878 5.844
AFFX-BioB-5_at 1212.4 7.1 7.031
AFFX-BioB-M_at 2399.3 7.783 7.718
AFFX-BioB-3_at 1648.7 7.408 7.346
AFFX-BioC-5_at 3189.2 8.068 8.013
AFFX-BioC-3_at 3004.3 8.008 7.952
AFFX-BioDn-5_at 2604.6 7.865 7.807
AFFX-BioDn-3_at 12629.7 9.444 9.435
AFFX-CreX-5_at 29317 10.286 10.293
AFFX-CreX-3_at 40690.6 10.614 10.619
AFFX-BioB-5_st 366.7 5.905 5.844
AFFX-BioB-M_st 206.3 5.329 5.284
AFFX-BioB-3_st 116.6 4.759 4.782
AFFX-BioC-5_st 57.6 4.054 4.108
AFFX-BioC-3_st 25.2 3.227 3.329
AFFX-BioDn-5_st 82.9 4.418 4.458
AFFX-BioDn-3_st 318.9 5.765 5.718

Total number of rows: 11934

Table truncated, full table size 324 Kbytes.




Supplementary data files not provided

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