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Sample GSM131106 Query DataSets for GSM131106
Status Public on Jan 08, 2007
Title Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1
Sample type RNA
 
Source name oleracea
Organism Arabidopsis thaliana
Characteristics Tissue: shoot tissue
Genetic variation: Brassica oleracea var. alboglabra (A12dH)
Extracted molecule total RNA
Label biotin
 
Description Light: 16 h daylength
Medium: compost
Temperature: 22°C
Humidity: 70-80%
Watering regime: watered daily with deionised water
Stratification: 3 to 5 days in sterile distilled water at 4°C
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5614 Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 1.05828000000000E+004 P 2.44000000000000E-004
AFFX-r2-P1-cre-3_at 1.14517000000000E+004 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-5_at 1.80110000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-3_at 2.51320000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-5_at 6.03200000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-3_at 7.46400000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-M_at 3.07700000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-5_at 1.93400000000000E+002 P 1.95300000000000E-003
AFFX-r2-Ec-bioB-3_at 2.58600000000000E+002 P 7.32000000000000E-004
AFFX-r2-Bs-thr-M_s_at 6.08000000000000E+001 A 3.03711000000000E-001
AFFX-r2-Bs-thr-5_s_at 8.33000000000000E+001 A 1.11572000000000E-001
AFFX-r2-Bs-thr-3_s_at 8.10000000000000E+000 A 8.50342000000000E-001
AFFX-r2-Bs-phe-M_at 3.10000000000000E+000 A 6.96289000000000E-001
AFFX-r2-Bs-phe-5_at 1.14000000000000E+001 A 5.67627000000000E-001
AFFX-r2-Bs-phe-3_at 2.56000000000000E+001 A 6.33789000000000E-001
AFFX-r2-Bs-lys-M_at 1.50000000000000E+000 A 6.01074000000000E-001
AFFX-r2-Bs-lys-5_at 1.30000000000000E+000 A 6.65527000000000E-001
AFFX-r2-Bs-lys-3_at 3.49000000000000E+001 A 3.34473000000000E-001
AFFX-r2-Bs-dap-M_at 7.00000000000000E-001 A 6.65527000000000E-001
AFFX-r2-Bs-dap-5_at 4.30000000000000E+000 A 5.00000000000000E-001

Total number of rows: 19642

Table truncated, full table size 1076 Kbytes.




Supplementary file Size Download File type/resource
GSM131106.CEL.gz 2.1 Mb (ftp)(http) CEL

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