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GEO accession:
Sample GSM12812
Query DataSets for GSM12812
Status
Public on Dec 22, 2003
Title
HS27a+CD14-6
Sample type
RNA
Channel 1
Source name
HS27a alone
Organism
Homo sapiens
Extracted molecule
total RNA
Channel 2
Source name
HS27a + monocyte coculture, Donor 6
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Comparison of gene expression profile of human bone marrrow stromal cell line HS27a cultured 3 days with and without monocytes. Values are ratio of 3-day HS27a plus monocyte coculture to HS27a alone.
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Lynn Graf
E-mail(s)
[email protected]
Phone
206-667-4545
Fax
206-667-5978
URL
http://none
Organization name
Fred Hutchinson Cancer Research Center
Department
Clinical Research Division
Lab
Torok-Storb
Street address
1100 Fairview Ave. N. D1-100
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Platform ID
GPL44
Series (1)
GSE831
stroma+monocytes
Data table header descriptions
ID_REF
reference to platform GPL44
VALUE
normalized log base 2 of ratio of medians of HS-27a + monocytes to HS-27a alone
LINEARIZED_VALUE
Linear transform of the normalized log of ratio
CH_1
signal at 635nm - background 635nm (HS-27a alone)
CH_2
signal at 532 nm - background at 532 nm (HS-27a + monocytes 3 days)
FLAGS
quality measure of individual spots (negative value indicates substandard signal )
Data table
ID_REF
VALUE
LINEARIZED_VALUE
CH_1
CH_2
FLAGS
1
0.580052192
1.494903328
4182
2873
0
2
0.207052192
1.154327176
680
605
0
3
0.238052192
1.179399258
216
188
0
4
0.505052192
1.419174696
3376
2443
0
5
0.362052192
1.285252833
1075
859
0
6
0.209052192
1.155928523
795
706
0
7
0.390052192
1.31044081
1193
935
0
8
0.979052192
1.971169983
48
25
-50
9
-0.623947808
0.648892858
79
125
0
10
-0.192947808
0.874816412
577
677
0
11
0.051052192
1.036020243
443
439
0
12
-0.512947808
0.700789076
86
126
0
13
0.303052192
1.233751802
882
734
0
14
-1.087947808
0.470430072
22
48
-50
15
0.420052192
1.337975957
2877
2207
0
16
0.403052192
1.322302441
604
469
0
17
-0.376947808
0.770065032
69
92
0
18
0.366052192
1.288821255
935
745
0
19
0.347052192
1.271959021
4545
3668
0
20
-0.116947808
0.922136477
106
118
0
Total number of rows:
17588
Table truncated, full table size
688 Kbytes
.
Supplementary data files not provided
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