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Status
Public on Feb 09, 2002
Title
FHCRC Human 18K Array
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens
Description
Microarray construction and hybridization protocols were modified from DeRisi, J.L., V.R Iyer, and P.O. Brown. Science 278:680-686, 1997. The microarrays were constructed using a set of more than 17000 sequence-verified clones from Research Genetics (UniGene Build 136). The cDNA inserts were amplified from replica plate cultures by PCR, purified and mechanically spotted onto polylysine-coated microscope slides using an OmniGrid robotic spotter (GeneMachines, San Carlo, CA).
Contributor(s)
Delrow J , Graf L Submission date
Feb 04, 2002
Last update date
Jan 18, 2013
Contact name
Lynn Graf
E-mail(s)
[email protected] Phone
206-667-4545
Fax
206-667-5978
URL
http://none Organization name
Fred Hutchinson Cancer Research Center
Department
Clinical Research Division
Lab
Torok-Storb
Street address
1100 Fairview Ave. N. D1-100
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Samples (39)
GSM825 , GSM827 , GSM828 , GSM829 , GSM830 , GSM831
GSM832 ,
GSM833 ,
GSM834 ,
GSM835 ,
GSM836 ,
GSM837 ,
GSM838 ,
GSM839 ,
GSM840 ,
GSM841 ,
GSM6818 ,
GSM6819 ,
GSM6820 ,
GSM6821 ,
GSM6822 ,
GSM6823 ,
GSM6824 ,
GSM6825 ,
GSM12771 ,
GSM12774 ,
GSM12775 ,
GSM12776 ,
GSM12810 ,
GSM12812 ,
GSM12829 ,
GSM76890 ,
GSM76891 ,
GSM78483 ,
GSM78488 ,
GSM78492 ,
GSM78494 ,
GSM78495 ,
GSM78496 Series (6)
GSE453 fhCMV-H vs fhCMV-T
GSE463 Profiling of human bone marrow stromal cell lines HS-5 and HS-27a
GSE501 Cytomegalovirus infection
GSE831 stroma+monocytes
GSE3464 Comparison of monocytes from G-CSF mobilized and normal peripheral blood
GSE3472 Bone marrow microenvironment: interaction of monocytes and stromal cells
Data table header descriptions ID GB_LIST GenBank Accession Number
CLONE_ID Research Genetics Clone ID or in-house designator
DESCRIPTION GenBank-derived descriptor provided by Research Genetics
GENE_SYMBOL UniGene name, as of June 2000
UNIGENE UniGene identifier (UniGene Build 136)
SPOT_ID Spot identifier
Data table ID GB_LIST CLONE_ID DESCRIPTION GENE_SYMBOL UNIGENE SPOT_ID 1
R44955 IMAGE:20064
hect domain and RLD 2
HERC2
266933
2
R45009 IMAGE:20115
solute carrier family 9 (sodium/hydrogen exchanger), isoform 6
SLC9A6
62185
3
T65150 IMAGE:21567
ESTs
12755
4
T65407 IMAGE:21738
L-3-hydroxyacyl-Coenzyme A dehydrogenase, short chain
HADHSC
8110
5
T65211 IMAGE:21899
SFRS protein kinase 2
SRPK2
78353
6
T72533 IMAGE:21920
Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 21920
185701
7
T72535 IMAGE:21922
ESTs
189825
8
T72543 IMAGE:21931
ESTs
187405
9
T72578 IMAGE:21941
ESTs
12583
10
T72581 IMAGE:22040
matrix metalloproteinase 9 (gelatinase B, 92kD gelatinase, 92kD type IV collagenase)
MMP9
151738
11
T66180 IMAGE:22074
thyroid hormone receptor, alpha (avian erythroblastic leukemia viral (v-erb-a) oncogene homolog)
THRA
724
12
T72555 IMAGE:22134
ESTs
12573
13
T72562 IMAGE:22144
Homo sapiens mRNA; cDNA DKFZp547M073 (from clone DKFZp547M073)
112198
14
T72596 IMAGE:22154
ESTs
12594
15
T66154 IMAGE:22161
Homo sapiens cDNA: FLJ22050 fis, clone HEP09454
173705
16
T82453 IMAGE:22274
ESTs, Weakly similar to T12482 hypothetical protein DKFZp564P0662.1 [H.sapiens]
192897
17
T87216 IMAGE:22279
chromosome 6 open reading frame 4
C6ORF4
13218
18
T88939 IMAGE:22334
ESTs
268740
19
T89094 IMAGE:22355
regulator of G-protein signalling 4
RGS4
227571
20
T89096 IMAGE:22359
ESTs
4840
17588 1156 Kbytes .Supplementary data files not provided
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