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Sample GSM1144650 Query DataSets for GSM1144650
Status Public on Nov 24, 2013
Title rat bladder, no obstruction_2A, mRNA
Sample type RNA
 
Source name control bladders
Organism Rattus norvegicus
Characteristics tissue: Urinary bladders
related mirna sample: GSM1144516
Extracted molecule total RNA
Extraction protocol unknown
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip rat Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix GeneArray Scanner 3000.
Description rat bladder, no obstruction_2A
Data processing The data were analyzed using expression console software version 1.1.2 using default analysis settings and RMA as normalization method.
 
Submission date May 20, 2013
Last update date Nov 24, 2013
Contact name Mari Ekman
E-mail(s) [email protected]
Organization name Lund University
Street address BMC D12
City Lund
State/province Sverige
ZIP/Postal code 221 84
Country Sweden
 
Platform ID GPL6247
Series (1)
GSE47080 Partial urethra obstruction in rat

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
10701620 43.20907
10701630 11.80689
10701632 8.362742
10701636 31.27669
10701643 14.33428
10701648 11.6096
10701654 11.2261
10701663 170.5519
10701666 43.71107
10701668 80.57933
10701671 27.9465
10701674 32.6613
10701679 50.89472
10701684 89.30161
10701689 249.0386
10701691 115.6248
10701697 399.9508
10701699 305.1266
10701709 1776.957
10701714 85.59618

Total number of rows: 29214

Table truncated, full table size 510 Kbytes.




Supplementary file Size Download File type/resource
GSM1144650_mari.ekman_med.lu.se_1_2_Sham_op_2A.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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