 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Nov 24, 2013 |
| Title |
Partial urethra obstruction in rat |
| Platform organisms |
Rattus norvegicus; synthetic construct |
| Sample organism |
Rattus norvegicus |
| Experiment type |
Non-coding RNA profiling by array
Expression profiling by array
|
| Summary |
Urethra was partially ligated and the urinary bladder was removed 10 days or 6 weeks after obstruction. Sham operated rats were used as controls. An addtitonal group of rats were repoerated 6 weeks after surgery and the obstruction was removed. These rats were then sacrificed 10 days after deobstruction. The bladder (including the urothelium) was frozen and used for RNA extraction.
|
| |
|
| Overall design |
Urinary bladders from sham-operated, 10 days and 6 weeks after obstruction and rats 10 days after deobstruction were compared. mRNA and microRNA were both analyzed.
|
| |
|
| Contributor(s) |
Ekman M, Swärd K, Albinsson S, Uvelius B |
| Citation(s) |
24340017, 25617893, 27581066, 36232634, 38956767 |
| |
| Submission date |
May 19, 2013 |
| Last update date |
Aug 01, 2024 |
| Contact name |
Mari Ekman |
| E-mail(s) |
[email protected]
|
| Organization name |
Lund University
|
| Street address |
BMC D12
|
| City |
Lund |
| State/province |
Sverige |
| ZIP/Postal code |
221 84 |
| Country |
Sweden |
| |
|
| Platforms (2) |
| GPL6247 |
[RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] |
| GPL16384 |
[miRNA-3] Affymetrix Multispecies miRNA-3 Array |
|
| Samples (52)
|
| GSM1144518 |
rat bladder, 10d obstruction_1A |
| GSM1144519 |
rat bladder, 10d obstruction_2A |
| GSM1144520 |
rat bladder, 10d obstruction_3A |
| GSM1144521 |
rat bladder, 6w obstruction_1A |
| GSM1144522 |
rat bladder, 6w obstruction_2A |
| GSM1144523 |
rat bladder, 6w obstruction_3A |
| GSM1144524 |
rat bladder, 10d deobstruction_1A |
| GSM1144525 |
rat bladder, 10d deobstruction_2A |
| GSM1144526 |
rat bladder, 10d deobstruction_3A |
| GSM1144527 |
rat bladder, no obstruction_4A |
| GSM1144528 |
rat bladder, no obstruction_5A |
| GSM1144529 |
rat bladder, no obstruction_6A |
| GSM1144530 |
rat bladder, 10d obstruction_4A |
| GSM1144531 |
rat bladder, 10d obstruction_5A |
| GSM1144532 |
rat bladder, 10d obstruction_6A |
| GSM1144533 |
rat bladder, 6w obstruction_4A |
| GSM1144534 |
rat bladder, 6w obstruction_5A |
| GSM1144535 |
rat bladder, 6w obstruction_6A |
| GSM1144536 |
rat bladder, 6w obstruction_8 |
| GSM1144537 |
rat bladder, 6w obstruction_11 |
| GSM1144538 |
rat bladder, 10d deobstruction_4A |
| GSM1144539 |
rat bladder, 10d deobstruction_5A |
| GSM1144540 |
rat bladder, 10d deobstruction_6A |
| GSM1144649 |
rat bladder, no obstruction_1A, mRNA |
| GSM1144650 |
rat bladder, no obstruction_2A, mRNA |
| GSM1144651 |
rat bladder, no obstruction_3A, mRNA |
| GSM1144652 |
rat bladder, 10d obstruction_1A, mRNA |
| GSM1144653 |
rat bladder, 10d obstruction_2A, mRNA |
| GSM1144654 |
rat bladder, 10d obstruction_3A, mRNA |
| GSM1144655 |
rat bladder, 6w obstruction_1A, mRNA |
| GSM1144656 |
rat bladder, 6w obstruction_2A, mRNA |
| GSM1144657 |
rat bladder, 6w obstruction_3A, mRNA |
| GSM1144658 |
rat bladder, 10d deobstruction_1A, mRNA |
| GSM1144659 |
rat bladder, 10d deobstruction_2A, mRNA |
| GSM1144660 |
rat bladder, 10d deobstruction_3A, mRNA |
| GSM1144661 |
rat bladder, no obstruction_4A, mRNA |
| GSM1144662 |
rat bladder, no obstruction_5A, mRNA |
| GSM1144663 |
rat bladder, no obstruction_6A, mRNA |
| GSM1144664 |
rat bladder, 10d obstruction_4A, mRNA |
| GSM1144665 |
rat bladder, 10d obstruction_5A, mRNA |
| GSM1144666 |
rat bladder, 10d obstruction_6A, mRNA |
| GSM1144667 |
rat bladder, 6w obstruction_4A, mRNA |
| GSM1144668 |
rat bladder, 6w obstruction_5A, mRNA |
| GSM1144669 |
rat bladder, 6w obstruction_6A, mRNA |
| GSM1144670 |
rat bladder, 6w obstruction_8, mRNA |
| GSM1144671 |
rat bladder, 6w obstruction_11, mRNA |
| GSM1144672 |
rat bladder, 10d deobstruction_4A, mRNA |
| GSM1144673 |
rat bladder, 10d deobstruction_5A, mRNA |
| GSM1144674 |
rat bladder, 10d deobstruction_6A, mRNA |
|
| Relations |
| BioProject |
PRJNA203508 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE47080_RAW.tar |
155.8 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
|
|
|
|
 |
Less...
More...