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Series GSE89111 Query DataSets for GSE89111
Status Public on Oct 25, 2016
Title Targeted inhibition of platelet-derived growth factor signaling prevents muscle fiber growth during skeletal muscle hypertrophy
Organism Mus musculus
Experiment type Expression profiling by array
Summary The platelet-derived growth-factor receptors alpha and beta (PDGFRα and PDGFRβ) mark fibroblasts and pericytes in skeletal muscle, respectively. While the role that these cells play in muscle growth has been evaluated, it was not known whether the receptors that mark these cells play a role in controlling transcriptional and functional changes during skeletal muscle hypertrophy. To evaluate this, we inhibited PDGFR signaling in mice subjected to a synergist ablation muscle growth procedure, and measured changes 3 and 10 days later. The results indicated that PDGF signaling was required for fiber hypertrophy and ECM production that occur during muscle growth.
 
Overall design 10 pooled samples total. Equal amounts of RNA isolated from four individual muscles were pooled into a single sample for microarray analysis, and two pooled samples from each group were analyzed. RNA was pooled because gene expression from a pooled sample is similar to the average of the individual samples composing the pooled sample.
 
Contributor(s) Sugg KB, Korn MA, Sarver DC, Markworth JF, Mendias CL
Citation(s) 28129672
Submission date Oct 24, 2016
Last update date Jul 12, 2019
Contact name Christopher Louis Mendias
E-mail(s) [email protected]
Phone 734-764-4206
Organization name University of Michigan
Department Orthopaedic Surgery
Lab Mendias Lab
Street address 109 Zina Pitcher Place
City Ann Arbor
State/province Michigan
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL17400 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [transcript (gene) version]
Samples (10)
GSM2358961 3 day control [Mendias_001_01]
GSM2358962 3 day control [Mendias_002_02]
GSM2358963 3 day treatment [Mendias_003_03]
Relations
BioProject PRJNA350307

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89111_RAW.tar 39.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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