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Series GSE84289 Query DataSets for GSE84289
Status Public on Dec 20, 2017
Title Temporal analysis of hippocampal gene co-expression networks in the hyperthermia model of febrile seizures
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary This study sought to investigate temporal changes in hippocampal gene co-expression networks during the development of rats submitted to hyperthermic seizures
 
Overall design Total RNA was obtained from the rat ventral hippocampal CA3 region at four time points after HS and then subjected to oligonucleotide microarray profiling. Rat pups (n = 6-8 per group and time period) were divided into two groups: controls (CTRL) and animals submitted to hyperthermia-induced seizures (HS). The temporal endpoints were selected to investigate the acute (P12), latent (P30 and P60) and chronic (P120) stages of the animal model. A weighted gene co-expression network analysis was employed to investigate modules of co-expressed genes, as these genes may be associated to common biological functions. Differentially expressed genes were determined between the hyperthermic seizures group and the normothermic controls for each time interval.
 
Contributor(s) Azevedo H, Khaled N, Santos P, Bertonha F, Moreira-Filho CA
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Submission date Jul 12, 2016
Last update date Dec 22, 2017
Contact name Hatylas Azevedo
Organization name University of São Paulo
Department Pediatrics
Street address Doutor Arnaldo Avenue, 455
City São Paulo
State/province Sao Paulo
ZIP/Postal code 01246903
Country Brazil
 
Platforms (1)
GPL14746 Agilent-028282 Whole Rat Genome Microarray 4x44K v3 (Probe Name version)
Samples (55)
GSM2230868 CA3V_hippocampus_P120_Control_1
GSM2230869 CA3V_hippocampus_P120_Control_2
GSM2230870 CA3V_hippocampus_P120_Control_3
Relations
BioProject PRJNA328600

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84289_RAW.tar 489.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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