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Series GSE84092 Query DataSets for GSE84092
Status Public on Mar 14, 2017
Title Effects of selection on residual feed intake and diet on gene expression in pig skeletal muscle
Organism Sus scrofa
Experiment type Expression profiling by array
Summary Transcriptional profiling in skeletal muscle of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated.
 
Overall design Four experimental groups: low-RFI pigs fed high fat, high fiber diet (HF_RFIneg), high-RFI pigs fed high fat, high fiber diet(HF_RFIpl), low-RFI pigs fed low fat, low fiber diet (LF_RFIneg) and high-RFI pigs fed low fat, low fiber diet(LF_RFIpl). 12 pigs per condition. One replicate per array.
 
Contributor(s) Vincent A, Louveau I, Gondret F
Citation(s) 31419934, 28327084
Submission date Jul 06, 2016
Last update date Mar 16, 2020
Contact name Annie Vincent
E-mail(s) [email protected]
Organization name INRA
Lab UMR PEGASE
Street address domaine de la prise
City Saint-Gilles
ZIP/Postal code 35590
Country France
 
Platforms (1)
GPL16524 Agilent-037880/INRA Sus scrofa 60K v1 (enriched with immune system muscle and adipose tissue genes) [Feature numbers]
Samples (48)
GSM2227128 skeletalmuscle_HF_RFIneg_rep1_39
GSM2227129 skeletalmuscle_HF_RFIneg_rep1_17
GSM2227130 skeletalmuscle_HF_RFIneg_rep1_46
This SubSeries is part of SuperSeries:
GSE84093 Effects of selection on residual feed intake and diet on gene expression
Relations
BioProject PRJNA328013

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84092_RAW.tar 506.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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