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| Status |
Public on Sep 01, 2016 |
| Title |
Circadian gene expression profile of pancreatic islets from C57BL6 mice fed on rodent chow diet collected at 4hr intervals around the clock |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
Comparison of pancreatic islet transcriptome at 4hr intervals around the clock helps to identify genes that are cycling under the control of the circadian clock. We used Agilent microarrays to analyze pancreatic islet transcriptome at different time points across the circadian cycle.
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| Overall design |
Pancreatic islets were isloated at ZT0, ZT4, ZT8, ZT12, ZT16, and ZT20 (ZT0 corresponds to lights on - 06:00hr and ZT12 corresponds to lights off - 18:00hr in a 12hr light, 12hr dark cycle). Pooled RNA samples, 3-5 mice per group, were used for the array.
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| Contributor(s) |
Rakshit K, Matveyenko AV |
| Citation(s) |
27495157 |
| |
| Submission date |
Apr 26, 2016 |
| Last update date |
Nov 01, 2017 |
| Contact name |
Aleksey V Matveyenko |
| Organization name |
Mayo Clinic
|
| Department |
Physiology and Biomedical Engineering
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| Lab |
Islet Regeneration
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| Street address |
200 First St SW
|
| City |
Rochester |
| State/province |
MN |
| ZIP/Postal code |
55905 |
| Country |
USA |
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| Platforms (1) |
| GPL11202 |
Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA319718 |
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