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Series GSE79847 Query DataSets for GSE79847
Status Public on Mar 08, 2017
Title Hyponutrition during pregnancy after insemination alters the progenies’ behavior and DNA methylation of their brain
Organism Mus musculus
Experiment type Methylation profiling by genome tiling array
Expression profiling by array
Summary Recent epidemiological studies suggest that hyponutritional stress during fetal period increase risks of adult-onset diseases, such as type 2 diabetes and mental diseases. Rodent models have demonstrated that hyponutrition during pregnancy alters epigenetic status of neuronal genes in the fetal brains; this implicate fatal environment contributes to susceptibility to mental disorders. However, in these studies, progenies were generated with natural mating and effects of hyponutrition during egg formation have not been eliminated. Therefore, we conducted experiments in order to finely evaluate the hyponutritional effects during fatal life using in vitro fertilization. We divided three experimental groups such as control diet (CD (AIN93G)), protein-restricted diet (PR), and PR diet with supplemental folic acid (FA) and compared body weight of mother and progenies, clinical-blood biochemistry, DNA methylation and gene-expression pattern in adult brain of the progenies, behavioral phenotypes of the progenies, and DNA methylation profile in brain of the progenies. The progenies of the PR group and the FA group exhibited increased activity in the home cage, decreased contact to a novel object, and decreased social behavior compared with the CD group. Increased home-cage activity in the PR group was rescued in the FA group. The progenies of the PR group and the FA group showed different patterns of mRNA expression and genomic methylation in the brain compared with the CD group. These results suggest that hyponutrition after insemination sufficiently induced phenotypic and epigenetic changes in the progenies. In addition, supplemental nutrition to mothers should rescue the epigenetic and phenotypic changes induced with hyponutrition.
 
Overall design For methylation study, there were in total 22 samples: 11 Input files (3 controls diet (CD) sammples, 4 protein-restricted diet (PR) samples, 4 PR diet with supplemental folic acid (FA) samples). In addition, gene expression profiles were analyzed to identify the effects of prenatal maternal diet and to the next generation. Four male mice of three experimental conditions (CD, PR and FA) were analyzed.
 
Contributor(s) Furuse T, Miyake K, Kohda T, Kaneda H, Hirasawa T, Yamada I, Kushida T, Kashimura M, Kobayashi K, Ishino F, Kubota T, Wakana S
Citation(s) 28127411
Submission date Apr 01, 2016
Last update date Nov 01, 2017
Contact name Kunio Miyake
E-mail(s) [email protected]
Organization name Yamanashi University
Street address 1110 Shimokato
City Chuoshi
State/province Yamanashi
ZIP/Postal code 4093898
Country Japan
 
Platforms (2)
GPL5811 [Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array
GPL11202 Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version)
Samples (23)
GSM2107215 CD_N1_MBD
GSM2107216 CD_N2_MBD
GSM2107217 CD_N4_MBD
Relations
BioProject PRJNA317377

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79847_RAW.tar 707.5 Mb (http)(custom) TAR (of BAR, CEL, TXT)
Processed data provided as supplementary file
Processed data included within Sample table

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