|
| Status |
Public on Aug 25, 2016 |
| Title |
RNAPol2 accounts for tumor cells liability to JQ1 [ChIP-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We here use B-cell tumors as a model to address the mechanism of action of JQ1, a widely used BET inhibitor.
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| |
|
| Overall design |
Examination of transcription factor chromatin binding sites and histone marks in RAJI cells upon JQ1 treatment
Please note that only a graphical output (i.e. an enrichment plot over genes) was generated using raw BAM files for the following samples (i.e. no processed data file);
Pol2SerP2_DMSO_ChIP
Pol2SerP5_DMSO_ChIP
Pol2SerP2_JQ1_ChIP
Pol2SerP5_JQ1_ChIP
Raji_ChIPSeq_Pol2_JQ1_6h
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| |
|
| Contributor(s) |
Campaner S, Croci O, Donato E |
| Citation(s) |
27443262 |
| |
| Submission date |
Dec 20, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
stefano campaner |
| E-mail(s) |
[email protected]
|
| Organization name |
fondazione Istituto italiano di tecnologia
|
| Department |
Center for Genomic Science
|
| Lab |
Cancer Biology
|
| Street address |
via adamello 16
|
| City |
milano |
| ZIP/Postal code |
20139 |
| Country |
Italy |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (22)
|
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| This SubSeries is part of SuperSeries: |
| GSE76192 |
RNAPol2 accounts for tumor cells liability to JQ1 |
|
| Relations |
| BioProject |
PRJNA306758 |
| SRA |
SRP067702 |
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