|
| Status |
Public on Dec 09, 2015 |
| Title |
TET-catalyzed 5-hydroxymethylcytosine regulates gene expression in differentiating colonocytes and colon cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
|
| Summary |
5-hydroxymethylcytosine (5-mC) and gene expression profiling of T84 cell differentiation; 5-hmC profiling of colon cancer colonocyte fractions
|
| |
|
| Overall design |
T84 cell differentiation was monitored as cells formed confluent monolayers in tissue culture
|
| |
|
| Contributor(s) |
Chapman CG, Mariani CJ, Wu F, Chuang A, Madzo J, Bissonette MB, Kwon JH, Godley LA |
| Citation(s) |
26631571 |
| |
| Submission date |
May 28, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Christopher Mariani |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Chicago
|
| Street address |
900 E 57 St
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60637 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (12)
|
|
| Relations |
| BioProject |
PRJNA285245 |
| SRA |
SRP058822 |
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