NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE6812 Query DataSets for GSE6812
Status Public on Dec 26, 2007
Title Gene expression in wild-type and transgenic plants overexpressing rice OsTOP6A1 gene
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary 10-day-old wild-type and homozygous transgenic Arabidopsis seedlings (overexpressing rice topoisomerase 6 subunit A1; OsTOP6A1) grown under normal growth conditions were used for total RNA isolation. The 5 micrograms of each total RNA sample was processed for microarray analysis according to Affymetrix protocol.
Keywords: Arabidopsis, wild-type and transgenic seedlings, differential gene expression
 
Overall design The experiment involves the study of differential gene expression in transgenic Arabidopsis seedlings overexpressing rice topoisomerase 6 subunit A1 (OsTOP6A1) cDNA as compared to wild-type.Three biological replicates for each sample were used for microarray analysis.
 
Contributor(s) Jain M, Tyagi AK, Khurana JP
Citation(s) 18071708
Submission date Jan 20, 2007
Last update date Aug 28, 2018
Contact name Mukesh Jain
Phone 91-11-26704686
Organization name Jawaharlal Nehru University
Street address New Mehrauli Road
City New Delhi
State/province New Delhi
ZIP/Postal code 110067
Country India
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (6)
GSM157144 Seedling_WT_rep1
GSM157145 Seedling_WT_rep2
GSM157146 Seedling_WT_rep3
Relations
BioProject PRJNA99187

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6812_RAW.tar 13.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap