|
| Status |
Public on Jul 21, 2015 |
| Title |
Genome-wide p53-occupancy in colorectal cancer cells. |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
In order to comprehensively identify genes directly regulated by p53, a genome-wide chromatin-immunoprecipitation analysis (ChIP) followed by next generation sequencing (ChIP-seq) was performed after activation of a conditional p53 allele in SW480 cells.
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| |
|
| Overall design |
SW480/pRTR-p53-VSV cells were subjected to ChIP-Seq analysis after 16 hours doxycycline-treatment.
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| |
|
| Contributor(s) |
Hermeking H, Hünten S |
| Citation(s) |
26183718 |
| |
| Submission date |
Mar 20, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Sabine Huenten |
| E-mail(s) |
[email protected]
|
| Organization name |
Ludwig-Maximilians-Universitaet Muenchen
|
| Street address |
Thalkirchner Strasse 36
|
| City |
Munich |
| ZIP/Postal code |
80336 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (2) |
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| This SubSeries is part of SuperSeries: |
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| Relations |
| BioProject |
PRJNA278972 |
| SRA |
SRP056368 |
