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Series GSE5743 Query DataSets for GSE5743
Status Public on Jan 08, 2007
Title Whole genome expression in response to herbicidal levels of 2,4-D application
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary This experiment was annotated by TAIR (http://www.arabidopsis.org).
In this experiment we examined whole genome response to herbicidal levels of 2,4-D application. Arabidopsis plants (14 days) grown in vitro on MS medium in petri dishes were flooded with 1 mL stock of 2,4-D to enable root uptake. Plants were treated with 1.0 mM 2,4-D for a period of 1 hour immediately after which RNA was extracted and used for the microarray based experiments. the goal of this study was to explore the herbicidal mode of action of auxinic herbicide 2,4-D.

Experimenter name = Chitra Raghavan
Experimenter department = Trevor Stevenson Laboratory
Experimenter institute = IRRI
Experimenter address = Entomology and Plant Pathology Division IRRI
Experimenter zip/postal_code = Manila 4031
Experimenter country = Philippines
Keywords: compound_treatment_design
 
Overall design 3 samples were used in this experiment
 
Contributor(s) Raghavan C, Stevenson T, Townsend H, Emmerson Z, Schildknecht B
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Submission date Sep 01, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) [email protected]
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (3)
GSM133887 Raghavan_1-1_CONTROL_Rep1_ATH1
GSM133888 Raghavan_1-2_1MM-1HR-A_Rep1_ATH1
GSM133889 Raghavan_1-3_1MM-1HR-B_Rep2_ATH1
Relations
BioProject PRJNA97059

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5743_RAW.tar 6.0 Mb (http)(custom) TAR (of CEL)

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