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| Status |
Public on Nov 25, 2024 |
| Title |
New genomic resources inform transcriptomic responses to heavy metal toxins in the common Eastern bumble bee Bombus impatiens |
| Organism |
Bombus impatiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The common Eastern bumble bee Bombus impatiens is native to North America and is the main commercially reared pollinator in the Americas. There has been extensive research on this species related to its social biology, applied pollination, and genetics. The genome of this species was previously sequenced using short-read technology, but recent technological advances provide an opportunity for substantial improvements. This species is common in agricultural and urban environments, and heavy metal contaminants produced by industrial processes can negatively impact it. To begin to identify possible mechanisms underlying responses to these toxins, we used RNA-sequencing to examine how exposure to a cocktail of four heavy metals at field-realistic levels from industrial areas affected B. impatiens worker gene expression.
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| |
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| Overall design |
To assess the effect of heavy metal exposure on Bombus impatiens, versus control individuals
|
| Web link |
https://doi.org/10.1186/s12864-024-11040-4
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| |
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| Contributor(s) |
Wyatt C, Masonbrink R, Toth A, Geist K |
| Citation(s) |
39563229 |
| |
| Submission date |
Jul 17, 2024 |
| Last update date |
Nov 25, 2024 |
| Contact name |
Christopher Douglas Robert Wyatt |
| E-mail(s) |
[email protected]
|
| Organization name |
UCL
|
| Street address |
Gower street
|
| City |
London |
| ZIP/Postal code |
WC1E 6BT |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL34712 |
Illumina HiSeq 3000 (Bombus impatiens) |
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| Samples (127)
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| Relations |
| BioProject |
PRJNA1136837 |
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