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Series GSE207662 Query DataSets for GSE207662
Status Public on Aug 12, 2023
Title Nutrient-driven dedifferentiation of enteroendocrine cells promotes adaptive intestinal growth
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Post-developmental organ resizing improves organismal fitness under constantly changing nutrient environments. Although stem cell abundance is a fundamental determinant of adaptive resizing, our understanding of its underlying mechanisms remains primarily limited to the regulation of stem cell division. Here, we demonstrate that nutrient fluctuation induces dedifferentiation in the Drosophila adult midgut to drive adaptive intestinal growth. From lineage tracing and single-cell RNA sequencing, we identify a subpopulation of enteroendocrine (EE) cells that convert into functional intestinal stem cells (ISCs) in response to dietary glucose and amino acids by activating the JAK-STAT pathway. Genetic ablation of EE-derived ISCs severely impairs ISC expansion and midgut growth despite the retention of resident ISCs, and in silico modeling further indicates that EE dedifferentiation enables an efficient increase in the midgut cell number while maintaining epithelial cell composition. Our findings identify a physiologically induced dedifferentiation that ensures ISC expansion during adaptive organ growth in concert with nutrient conditions.
 
Overall design Cells in the adult Drosophila midgut were collected from 1-day and 3-day old female adults and analysed by scRNA-seq.
Web link https://www.cell.com/developmental-cell/fulltext/S1534-5807(23)00437-9
 
Contributor(s) Nagai H, Nagai LA, Tasaki S, Nakato R, Miura M, Nakajima Y
Citation(s) 37689060
Submission date Jul 07, 2022
Last update date Nov 12, 2023
Contact name Luis Augusto Eijy Nagai
E-mail(s) [email protected]
Organization name The University of Tokyo
Department Institute for Quantitative Biosciences
Lab Laboratory of Computational Genomics
Street address #201 Main building, Institute for Quantitative Biosciences, 1-1-1 Yayoi
City Bunkyo-ku
State/province Tokyo
ZIP/Postal code 113-0032
Country Japan
 
Platforms (1)
GPL32218 DNBSEQ-G400 (Drosophila melanogaster)
Samples (2)
GSM6304483 One-day old
GSM6304484 Three-day old
Relations
BioProject PRJNA856647

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Supplementary file Size Download File type/resource
GSE207662_metadata.csv.gz 397.4 Kb (ftp)(http) CSV
GSE207662_normalized_matrix.csv.gz 13.7 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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