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Series GSE20591 Query DataSets for GSE20591
Status Public on May 10, 2010
Title Expression data of β-subunit of Snf1 kinase in yeast Saccharomyces cerevisiae
Platform organisms Schizosaccharomyces pombe; Saccharomyces cerevisiae
Sample organism Saccharomyces cerevisiae
Experiment type Expression profiling by array
Summary The conserved Snf1/AMPK (AMP-activated protein Kinase) family is one of the central components in nutrient sensing and regulation of carbon metabolism in eukaryotes. It is also involved in several other processes such as stress resistance, invasive growth and ageing. Snf1 kinase is composed of a catalytic α-subunit Snf1, a regulatory γ-subunit Snf4 and one of three possible β-subunits, Sip1, Sip2 or Gal83. We used a systematic approach to study the role of the three β-subunits by analyzing all 7 possible combinations of β-subunit deletions together with the reference strain.
 
Overall design 7 mutant strains together with 1 reference strain grown under glucose-limited condition with three biological replicates for each strain
 
Contributor(s) Zhang J, Olsson L, Nielsen J
Citation(s) 20545859
Submission date Mar 02, 2010
Last update date Feb 21, 2017
Contact name Jie Zhang
E-mail(s) [email protected]
Phone +45 52710377
Organization name Technical University of Denmark
Department CFB
Lab SBTY
Street address Kemitorvet 220
City Kgs. Lyngby
ZIP/Postal code 2800
Country Denmark
 
Platforms (1)
GPL2529 [Yeast_2] Affymetrix Yeast Genome 2.0 Array
Samples (24)
GSM517167 reference strain_biological rep1
GSM517168 reference strain_biological rep2
GSM517169 reference strain_biological rep3
Relations
BioProject PRJNA124825

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20591_RAW.tar 25.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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