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| Status |
Public on Dec 27, 2022 |
| Title |
Recycling of parental histones preserves the epigenetic landscape during embryonic development |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
36724233 |
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| Submission date |
May 20, 2022 |
| Last update date |
Mar 02, 2023 |
| Contact name |
Ufuk Günesdogan |
| E-mail(s) |
[email protected]
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| Organization name |
University of Göttingen
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| Street address |
Justus-von-Liebig Weg 11
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| City |
Göttingen |
| ZIP/Postal code |
37077 |
| Country |
Germany |
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| Platforms (3) |
| GPL19132 |
Illumina NextSeq 500 (Drosophila melanogaster) |
| GPL21306 |
Illumina HiSeq 4000 (Drosophila melanogaster) |
| GPL25244 |
Illumina NovaSeq 6000 (Drosophila melanogaster) |
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| Samples (154)
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| GSM6172745 |
HisC, 6.5-7h, rep1 |
| GSM6172746 |
w1118, 3.5-4h, rep1 |
| GSM6172747 |
w1118, 4.5-5h, rep1 |
| GSM6172748 |
w1118, 5.5-6h, rep1 |
| GSM6172749 |
w1118, 6.5-7h, rep1 |
| GSM6172750 |
HisC, 3.5-4h, rep2 |
| GSM6172751 |
HisC, 4.5-5h, rep2 |
| GSM6172752 |
HisC, 5.5-6h, rep2 |
| GSM6172753 |
HisC, 6.5-7h, rep2 |
| GSM6172754 |
w1118, 3.5-4h, rep2 |
| GSM6172755 |
w1118, 4.5-5h, rep2 |
| GSM6172756 |
w1118, 5.5-6h, rep2 |
| GSM6172757 |
w1118, 6.5-7h, rep2 |
| GSM6172758 |
HisC, 3.5-4h, rep3 |
| GSM6172759 |
HisC, 5.5-6h, rep3 |
| GSM6172760 |
HisC, 6.5-7h, rep3 |
| GSM6172761 |
w1118, 3.5-4h, rep3 |
| GSM6172762 |
w1118, 4.5-5h, rep3 |
| GSM6172763 |
w1118, 5.5-6h, rep3 |
| GSM6172764 |
w1118, 6.5-7h, rep3 |
| GSM6172781 |
HisC, 3.5-4h, ATACseq, rep1 |
| GSM6172782 |
w1118, 3.5-4h, ATACseq, rep1 |
| GSM6172783 |
HisC, 3.5-4h, ATACseq, rep2 |
| GSM6172784 |
w1118, 3.5-4h, ATACseq, rep2 |
| GSM6172785 |
HisC, 3.5-4h, ATACseq, rep3 |
| GSM6172786 |
w1118, 3.5-4h, ATACseq, rep3 |
| GSM6172787 |
HisC, 4.5-5h, ATACseq, rep1 |
| GSM6172788 |
w1118, 4.5-5h, ATACseq, rep1 |
| GSM6172789 |
HisC, 4.5-5h, ATACseq, rep2 |
| GSM6172790 |
w1118, 4.5-5h, ATACseq, rep2 |
| GSM6172791 |
HisC, 4.5-5h, ATACseq, rep3 |
| GSM6172792 |
w1118, 4.5-5h, ATACseq, rep3 |
| GSM6172793 |
HisC, 5.5-6h, ATACseq, rep1 |
| GSM6172794 |
w1118, 5.5-6h, ATACseq, rep1 |
| GSM6172795 |
HisC, 5.5-6h, ATACseq, rep2 |
| GSM6172796 |
w1118, 5.5-6h, ATACseq, rep2 |
| GSM6172797 |
HisC, 5.5-6h, ATACseq, rep3 |
| GSM6172798 |
w1118, 5.5-6h, ATACseq, rep3 |
| GSM6172799 |
HisC, 7.5-7h, ATACseq, rep1 |
| GSM6172800 |
w1118, 7.5-7h, ATACseq, rep1 |
| GSM6172801 |
HisC, 7.5-7h, ATACseq, rep2 |
| GSM6172802 |
w1118, 7.5-7h, ATACseq, rep2 |
| GSM6172803 |
HisC, 7.5-7h, ATACseq, rep3 |
| GSM6172804 |
w1118, 7.5-7h, ATACseq, rep3 |
| GSM6172805 |
HisC, 4.5-5h, H3K4me2, CUTAC, rep1 |
| GSM6172806 |
HisC, 4.5-5h, H3K4me2, CUTAC, rep2 |
| GSM6172807 |
w1118, 4.5-5h, H3K4me2, CUTAC, rep1 |
| GSM6172808 |
w1118, 4.5-5h, H3K4me2, CUTAC, rep2 |
| GSM6172809 |
HisC, 5.5-6h, H3K4me2, CUTAC, rep1 |
| GSM6172810 |
HisC, 5.5-6h, H3K4me2, CUTAC, rep2 |
| GSM6172811 |
w1118, 5.5-6h, H3K4me2, CUTAC, rep1 |
| GSM6172812 |
w1118, 5.5-6h, H3K4me2, CUTAC, rep2 |
| GSM6172832 |
HisC, 4.5-5h, H3K27ac, rep1 |
| GSM6172833 |
HisC, 4.5-5h, H3K27ac, rep2 |
| GSM6172834 |
HisC, 5.5-6h, H3K27ac, rep1 |
| GSM6172835 |
HisC, 5.5-6h, H3K27ac, rep2 |
| GSM6172836 |
w1118, 4.5-5h, H3K27ac, rep1 |
| GSM6172837 |
w1118, 4.5-5h, H3K27ac, rep2 |
| GSM6172838 |
w1118, 5.5-6h, H3K27ac, rep1 |
| GSM6172839 |
w1118, 5.5-6h, H3K27ac, rep2 |
| GSM6172840 |
HisC, 5.5-6h, H3K27me3, rep1 |
| GSM6172841 |
HisC, 5.5-6h, H3K27me3, rep2 |
| GSM6172845 |
HisC, 4.5-5h, H3K36me3, rep1 |
| GSM6172846 |
HisC, 4.5-5h, H3K36me3, rep2 |
| GSM6172847 |
HisC, 5.5-6h, H3K36me3, rep1 |
| GSM6172848 |
HisC, 5.5-6h, H3K36me3, rep2 |
| GSM6172849 |
w1118, 4.5-5h, H3K36me3, rep1 |
| GSM6172850 |
w1118, 4.5-5h, H3K36me3, rep2 |
| GSM6172851 |
w1118, 5.5-6h, H3K36me3, rep1 |
| GSM6172852 |
w1118, 5.5-6h, H3K36me3, rep2 |
| GSM6172853 |
HisC, 4.5-5h, H2AK9ac, rep1 |
| GSM6172854 |
HisC, 4.5-5h, H2AK9ac, rep2 |
| GSM6172855 |
HisC, 5.5-6h, H2AK9ac, rep1 |
| GSM6172856 |
HisC, 5.5-6h, H2AK9ac, rep2 |
| GSM6172857 |
HisC, 5.5-6h, H2AK9ac, rep3 |
| GSM6172858 |
w1118, 4.5-5h, H2AK9ac, rep1 |
| GSM6172859 |
w1118, 4.5-5h, H2AK9ac, rep2 |
| GSM6172860 |
w1118, 4.5-5h, H2AK9ac, rep3 |
| GSM6172861 |
w1118, 5.5-6h, H2AK9ac, rep1 |
| GSM6172862 |
w1118, 5.5-6h, H2AK9ac, rep2 |
| GSM6172863 |
HisC, 4.5-5h, H2BK16ac, rep1 |
| GSM6172864 |
HisC, 4.5-5h, H2BK16ac, rep2 |
| GSM6172865 |
HisC, 5.5-6h, H2BK16ac, rep1 |
| GSM6172866 |
HisC, 5.5-6h, H2BK16ac, rep2 |
| GSM6172867 |
w1118, 4.5-5h, H2BK16ac, rep1 |
| GSM6172868 |
w1118, 4.5-5h, H2BK16ac, rep2 |
| GSM6172869 |
w1118, 5.5-6h, H2BK16ac, rep1 |
| GSM6172870 |
w1118, 5.5-6h, H2BK16ac, rep2 |
| GSM6172871 |
HisC, 3.5-4h, H3K4me3, rep1 |
| GSM6172872 |
HisC, 3.5-4h, H3K4me3, rep2 |
| GSM6172873 |
HisC, 4.5-5h, H3K4me3, rep1 |
| GSM6172874 |
HisC, 4.5-5h, H3K4me3, rep2 |
| GSM6172875 |
HisC, 4.5-5h, H3K4me3, rep3 |
| GSM6172876 |
HisC, 5.5-6h, H3K4me3, rep1 |
| GSM6172877 |
HisC, 5.5-6h, H3K4me3, rep2 |
| GSM6172878 |
HisC, 5.5-6h, H3K4me3, rep3 |
| GSM6172879 |
w1118, 3.5-4h, H3K4me3, rep1 |
| GSM6172880 |
w1118, 3.5-4h, H3K4me3, rep2 |
| GSM6172881 |
w1118, 3.5-4h, H3K4me3, rep3 |
| GSM6172882 |
w1118, 4.5-5h, H3K4me3, rep1 |
| GSM6172883 |
w1118, 4.5-5h, H3K4me3, rep2 |
| GSM6172884 |
w1118, 4.5-5h, H3K4me3, rep3 |
| GSM6172885 |
w1118, 5.5-6h, H3K4me3, rep1 |
| GSM6172886 |
w1118, 5.5-6h, H3K4me3, rep2 |
| GSM6172887 |
w1118, 5.5-6h, H3K4me3, rep3 |
| GSM6172888 |
HisC, 5.5-6h, RNAP2, rep1 |
| GSM6172889 |
HisC, 5.5-6h, RNAP2, rep2 |
| GSM6172890 |
w1118, 5.5-6h, RNAP2, rep1 |
| GSM6172891 |
w1118, 5.5-6h, RNAP2, rep2 |
| GSM6172904 |
HisC, 5.5-6h, STRIPEseq, rep1 |
| GSM6172905 |
HisC, 5.5-6h, STRIPEseq, rep2 |
| GSM6172906 |
HisC, 5.5-6h, STRIPEseq, rep4 |
| GSM6172907 |
HisC, 5.5-6h, STRIPEseq, rep3 |
| GSM6172908 |
wm, 5.5-6h, STRIPEseq, rep1 |
| GSM6172909 |
wm, 5.5-6h, STRIPEseq, rep2 |
| GSM6172910 |
wm, 5.5-6h, STRIPEseq, rep4 |
| GSM6172911 |
wm, 5.5-6h, STRIPEseq, rep3 |
| GSM6172912 |
HisC, 6.5-7h, STRIPEseq, rep1 |
| GSM6172913 |
HisC, 6.5-7h, STRIPEseq, rep2 |
| GSM6172914 |
HisC, 6.5-7h, STRIPEseq, rep3 |
| GSM6172915 |
HisC, 6.5-7h, STRIPEseq, rep4 |
| GSM6172916 |
HisC, 6.5-7h, STRIPEseq, rep5 |
| GSM6172917 |
wm, 6.5-7h, STRIPEseq, rep1 |
| GSM6172918 |
wm, 6.5-7h, STRIPEseq, rep2 |
| GSM6172919 |
wm, 6.5-7h, STRIPEseq, rep3 |
| GSM6172920 |
wm, 6.5-7h, STRIPEseq, rep4 |
| GSM6172921 |
wm, 6.5-7h, STRIPEseq, rep5 |
| GSM6813264 |
CyO, 4.5-5h, H3K4me3, rep1 |
| GSM6813265 |
CyO, 5.5-6h, H3K4me3, rep1 |
| GSM6813266 |
CyO, 4.5-5h, H3K4me3, rep2 |
| GSM6813267 |
CyO, 5.5-6h, H3K4me3, rep2 |
| GSM6813268 |
HisC, 4.5-5h, RNAP2 ser2, rep1 |
| GSM6813269 |
HisC, 4.5-5h, RNAP2 ser2, rep2 |
| GSM6813270 |
HisC, 5.5-6h, RNAP2 ser2, rep1 |
| GSM6813271 |
HisC, 5.5-6h, RNAP2 ser2, rep2 |
| GSM6813272 |
w1118, 4.5-5h, RNAP2 ser2, rep1 |
| GSM6813273 |
w1118, 4.5-5h, RNAP2 ser2, rep2 |
| GSM6813274 |
w1118, 5.5-6h, RNAP2 ser2, rep1 |
| GSM6813275 |
w1118, 5.5-6h, RNAP2 ser2, rep2 |
| GSM6813276 |
w1118, 4.5-5h,H3K27me3, rep1 |
| GSM6813277 |
w1118, 5.5-6h,H3K27me3, rep1 |
| GSM6813278 |
w1118, 4.5-5h,H3K27me3, rep2 |
| GSM6813279 |
w1118, 5.5-6h,H3K27me3, rep2 |
| GSM6813280 |
HisC, 5.5-6h, H1, rep1 |
| GSM6813281 |
HisC, 5.5-6h, H1, rep2 |
| GSM6813282 |
HisC, 5.5-6h, H1, rep3 |
| GSM6813283 |
w1118, 5.5-6h,H1, rep1 |
| GSM6813284 |
w1118, 5.5-6h,H1, rep2 |
| GSM6813285 |
w1118, 5.5-6h,H1, rep3 |
| GSM6813286 |
HisC, 4.5-5h,H3K27me3, rep1 |
| GSM6813287 |
HisC, 4.5-5h,H3K27me3, rep2 |
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| This SuperSeries is composed of the following SubSeries:
|
| GSE203471 |
Recycling of parental histones preserves the epigenetic landscape during embryonic development (RNA-seq) |
| GSE203473 |
Recycling of parental histones preserves the epigenetic landscape during embryonic development (ATAC-seq) |
| GSE203474 |
Recycling of parental histones preserves the epigenetic landscape during embryonic development (CUTAC) |
| GSE203476 |
Recycling of parental histones preserves the epigenetic landscape during embryonic development (CUT&Tag) |
| GSE203477 |
Recycling of parental histones preserves the epigenetic landscape during embryonic development (STRIPE-seq) |
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| Relations |
| BioProject |
PRJNA840923 |
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