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Series GSE193787 Query DataSets for GSE193787
Status Public on Jun 30, 2023
Title Global gene expression profiles of phoB and phoU mutants of X. citri pv. glycines 12-2 conducted under phosphate limitation conditions in vitro using RNA-seq
Organism Xanthomonas citri pv. glycines
Experiment type Expression profiling by high throughput sequencing
Summary RNAseq analysis of Xanthomonas citri pv. glycines 12-2 wild-type, phoB and phoU mutants under phosphate limited condition
 
Overall design Sequencing was performed on cDNA prepared from mRNA isolated from the wild type, phoB and phoU mutants grown in MOPS minimal medium without added phosphate (0 Pi).
 
Contributor(s) Chatnaparat T
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Submission date Jan 17, 2022
Last update date Jun 30, 2023
Contact name Tiyakhon Chatnaparat
E-mail(s) [email protected]
Organization name Kasetsart University
Department Plant Pathology
Lab Phytobacteriology
Street address 50 Ngamwongwan Rd. Ladyao, Chatuchak
City Bangkok
ZIP/Postal code 10900
Country Thailand
 
Platforms (1)
GPL31233 Illumina NovaSeq 6000 (Xanthomonas citri pv. glycines)
Samples (9)
GSM5821094 WT1
GSM5821095 WT2
GSM5821096 WT3
Relations
BioProject PRJNA797996

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193787_RAW.tar 300.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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