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Series GSE18994 Query DataSets for GSE18994
Status Public on Feb 23, 2011
Title Expression profile of ypr045cāˆ† mutant
Platform organisms Schizosaccharomyces pombe; Saccharomyces cerevisiae
Sample organism Saccharomyces cerevisiae
Experiment type Expression profiling by array
Summary We report a new protein complex with a role in transcription elongation that is formed by Ypr045c (Thp3) and the Csn12 component of the COP9-signalosome. Thp3-Csn12 is recruited to transcribed genes. Their mutations suppress the gene expression defects of mutants of the THO complex involved in mRNP biogenesis and export and show defects in mRNA accumulation. In vivo transcription elongation impairment of thp3āˆ† mutants is shown by reduction of RNAPII recruitment throughout an active gene and in transcript run on analysis performed in G-less systems. This new complex establishes a novel link between transcription and mRNA processing.
 
Overall design Tthree repeats of the wild type control and three of the ypr045cāˆ† mutant (BY4741 background).
 
Contributor(s) Jimeno S, Aguilera A
Citation(s) 21149575
Submission date Nov 12, 2009
Last update date Feb 21, 2017
Contact name Sonia Jimeno
E-mail(s) [email protected]
Phone 0034954467728
Organization name CABIMER-CSIC
Department Molecular biology
Lab BM3
Street address Americo Vespucio s/n
City Seville
State/province Seville
ZIP/Postal code 41912
Country Spain
 
Platforms (1)
GPL2529 [Yeast_2] Affymetrix Yeast Genome 2.0 Array
Samples (6)
GSM469895 wild type rep-1
GSM469896 wild type rep-2
GSM469897 wild type rep-3
Relations
BioProject PRJNA120661

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18994_RAW.tar 6.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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