|
| Status |
Public on Oct 27, 2021 |
| Title |
Chromatin remodeler Brahma safeguards canalization in cardiac mesoderm differentiation [ATAC-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We performed ATAC-seq on WT and BRM KO ESCs and D2 EBs in 3 biological replicates follwing Corces et al., 2017 paper.
|
| |
|
| Overall design |
ATACSeq was performed for each samples with 50, 000 viable cells, libraries were sequenced with NEB nextSeq system using high throuput V2 150 cycle kit.
|
| |
|
| Contributor(s) |
Bruneau BG, Hota S |
| Citation(s) |
35082446 |
| |
| Submission date |
Jun 12, 2021 |
| Last update date |
Feb 04, 2022 |
| Contact name |
Benoit Bruneau |
| E-mail(s) |
[email protected]
|
| Organization name |
Gladstone Institute of Cardiovascular Disease
|
| Street address |
1650 Owens Street
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94158 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (12)
|
|
| This SubSeries is part of SuperSeries: |
| GSE150186 |
Brahma safeguards canalization of cardiac mesoderm differentiation |
|
| Relations |
| BioProject |
PRJNA737106 |
| SRA |
SRP323815 |
Less...
More...