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GEO accession:
Series GSE173981
Query DataSets for GSE173981
Status
Public on Oct 13, 2021
Title
The role of PARP-1 in estrogen-dependent transcription
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34158394
Submission date
May 06, 2021
Last update date
Oct 13, 2021
Contact name
W. Lee Kraus
E-mail(s)
[email protected]
Organization name
UT Southwestern Medical Center
Street address
5323 Harry Hines Blvd.
City
Dallas
State/province
TX
ZIP/Postal code
75390-8511
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (48)
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GSM5065093
ChIP-seq Luc KD-Veh Rep1 Input
GSM5065094
ChIP-seq Luc KD-Veh Rep2 Input
GSM5065095
ChIP-seq Luc KD-Veh Rep1 ERa
GSM5065096
ChIP-seq Luc KD-Veh Rep2 ERa
GSM5065097
ChIP-seq Luc KD-E2 Rep1 Input
GSM5065098
ChIP-seq Luc KD-E2 Rep2 Input
GSM5065099
ChIP-seq Luc KD-E2 Rep1 ERa
GSM5065100
ChIP-seq Luc KD-E2 Rep2 ERa
GSM5065101
ChIP-seq PARP-1 KD-Veh Rep1 Input
GSM5065102
ChIP-seq PARP-1 KD-Veh Rep2 Input
GSM5065103
ChIP-seq PARP-1 KD-Veh Rep1 ERa
GSM5065104
ChIP-seq PARP-1 KD-Veh Rep2 ERa
GSM5065105
ChIP-seq PARP-1 KD-E2 Rep1 Input
GSM5065106
ChIP-seq PARP-1 KD-E2 Rep2 Input
GSM5065107
ChIP-seq PARP-1 KD-E2 Rep1 ER
GSM5065108
ChIP-seq PARP-1 KD-E2 Rep2 ER
GSM5065109
ChIP-seq LucKD Veh Rep1 FOXA1 H3K27ac Input
GSM5065110
ChIP-seq LucKD Veh Rep2 FOXA1 H3K27ac Input
GSM5065111
ChIP-seq LucKD E2 Rep1 FOXA1 H3K27ac Input
GSM5065112
ChIP-seq LucKD E2 Rep2 FOXA1 H3K27ac Input
GSM5065113
ChIP-seq LucKD Veh Rep1 FOXA1
GSM5065114
ChIP-seq LucKD Veh Rep2 FOXA1
GSM5065115
ChIP-seq LucKD E2 Rep1 FOXA1
GSM5065116
ChIP-seq LucKD E2 Rep2 FOXA1
GSM5065117
ChIP-seq LucKD Veh Rep1 H3K27ac
GSM5065118
ChIP-seq LucKD Veh Rep2 H3K27ac
GSM5065119
ChIP-seq LucKD E2 Rep1 H3K27ac
GSM5065120
ChIP-seq LucKD E2 Rep2 H3K27ac
GSM5065121
ChIP-seq PARP-1KD Veh Rep1 FOXA1 H3K27ac Input
GSM5065122
ChIP-seq PARP-1KD Veh Rep2 FOXA1 H3K27ac Input
GSM5065123
ChIP-seq PARP-1KD E2 Rep1 FOXA1 H3K27ac Input
GSM5065124
ChIP-seq PARP-1KD E2 Rep2 FOXA1 H3K27ac Input
GSM5065125
ChIP-seq PARP-1KD Veh Rep1 FOXA1
GSM5065126
ChIP-seq PARP-1KD Veh Rep2 FOXA1
GSM5065127
ChIP-seq PARP-1KD E2 Rep1 FOXA1
GSM5065128
ChIP-seq PARP-1KD E2 Rep2 FOXA1
GSM5065129
ChIP-seq PARP-1KD Veh Rep1 H3K27ac
GSM5065130
ChIP-seq PARP-1KD Veh Rep2 H3K27ac
GSM5065131
ChIP-seq PARP-1KD E2 Rep1 H3K27ac
GSM5065132
ChIP-seq PARP-1KD E2 Rep2 H3K27ac
GSM5283809
RNAseq Luc KD Veh rep1
GSM5283810
RNAseq Luc KD Veh rep2
GSM5283811
RNAseq PARP-1 KD Veh rep1
GSM5283812
RNAseq PARP-1 KD Veh rep2
GSM5283813
RNAseq Luc KD E2 rep1
GSM5283814
RNAseq Luc KD E2 rep2
GSM5283815
RNAseq PARP-1 KD E2 rep1
GSM5283816
RNAseq PARP-1 KD E2 rep2
This SuperSeries is composed of the following SubSeries:
GSE166168
The role of PARP-1 in estrogen-dependent transcription [ChIP-seq]
GSE173976
The role of PARP-1 in estrogen-dependent transcription [RNA-seq]
Relations
BioProject
PRJNA727792
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MINiML formatted family file(s)
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Supplementary data files not provided
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