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Series GSE158589 Query DataSets for GSE158589
Status Public on Sep 22, 2021
Title iCLIP of HeLa cells with anti-TFIP11 antibody
Organism Homo sapiens
Experiment type Other
Summary iCLIP of HeLa cells with anti-TFIP11 antibody to investigate RNA binding locations of TFIP11 as part of a larger study on the function of TFIP11.
 
Overall design iCLIP of HeLa cells with anti-TFIP11 antibody. Two barcoded libraries (GGTT and TTGT) were used in the analysis.
 
Contributor(s) Mottet D, Duchemin A, O'Grady T, Audic Y, Méreau A
Citation(s) 34789764
Submission date Sep 25, 2020
Last update date Nov 19, 2021
Contact name Tina M O'Grady
E-mail(s) [email protected]
Phone 504-988-1169
Organization name Tulane Health Sciences Center
Department Pathology
Street address 1430 Tulane Ave., SL79
City New Orleans
State/province LA
ZIP/Postal code 70112
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (2)
GSM4803574 HeLa-TFIP11-iCLIP_GGTT
GSM4803575 HeLa-TFIP11-iCLIP_TTGT
This SubSeries is part of SuperSeries:
GSE156390 Role of TFIP11 in U6 snRNA modification and splicing efficiency
Relations
BioProject PRJNA665725
SRA SRP285409

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158589_RAW.tar 19.7 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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