|
| Status |
Public on Dec 22, 2009 |
| Title |
HTCC1062 glucose versus no carbon log phase |
| Platform organisms |
Candidatus Pelagibacter ubique HTCC1002; Candidatus Pelagibacter ubique HTCC1062; Candidatus Pelagibacter sp. HTCC7211 |
| Sample organism |
Candidatus Pelagibacter ubique HTCC1062 |
| Experiment type |
Expression profiling by array
|
| Summary |
The primary goal of this experiment is to examine the transcription profiles of HTCC1062 when grown in the presence or absence of D-glucose (30uM final concentration).
Experiment confirmed activity of predicted glycolysis operon.
|
| |
|
| Overall design |
Three biological replicates of HTCC1062 grown on glucose (30uM final conc) were compared to three biological replicate control treatments of HTCC1062 grown without glucose in the media.
|
| |
|
| Contributor(s) |
Schwalbach M, Steindler L, Giovannoni S |
| Citation(s) |
19889000 |
| |
| Submission date |
Feb 24, 2009 |
| Last update date |
Mar 20, 2012 |
| Contact name |
Michael S Schwalbach |
| Organization name |
University of Wisconsin-Madison
|
| Department |
Great Lakes Bioenergy Research Center
|
| Street address |
1550 Linden Dr
|
| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53706 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL7330 |
Candidatus Pelagibacter ubique OSU_SAR11_affychip |
|
| Samples (6)
|
| GSM373922 |
HTCC1062_No_carbon_control_latelog_rep1 |
| GSM373923 |
HTCC1062_No_carbon_control_latelog_rep2 |
| GSM373924 |
HTCC1062_No_carbon_control_latelog_rep3 |
|
| Relations |
| BioProject |
PRJNA111873 |
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