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Series GSE147856 Query DataSets for GSE147856
Status Public on Dec 09, 2020
Title To study the function of KLF5 in squamous cancers and gastrointestinal cancers
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 31, 2020
Last update date Dec 11, 2020
Contact name Xiaoyang Zhang
Organization name University of Utah
Lab Zhang lab
Street address 1950 CIrcle of Hope
City Salt Lake City
ZIP/Postal code 84112
Country USA
 
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL21697 NextSeq 550 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (34)
GSM4447195 ChIP-seq of KLF5 in AGS
GSM4447196 ChIP-seq of KLF5 in BICR31
GSM4447197 ChIP-seq of KLF5 in NCI-H508
This SuperSeries is composed of the following SubSeries:
GSE147853 To study the function of KLF5 in squamous cancers and gastrointestinal cancers [ChIP-seq]
GSE147854 To study the function of KLF5 in squamous cancers and gastrointestinal cancers [HiChIP]
GSE147855 To study the function of KLF5 in squamous cancers and gastrointestinal cancers [RNA-seq]
Relations
BioProject PRJNA622284

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147856_RAW.tar 3.2 Gb (http)(custom) TAR (of BEDPE, BW, TXT)
SRA Run SelectorHelp

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