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GEO accession:
Series GSE142163
Query DataSets for GSE142163
Status
Public on Sep 08, 2020
Title
Oocyte RNA-seq data of WT, Tet1-/- and Tet2-/-; RNA seq of PGC at E13.5
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Summary
Differential functions of Tet 1 and Tet2 in oocyte development and quality control link to reproductive aging
Overall design
We generated Tet1/2 knock out mice to study the function of Tet1/2
Contributor(s)
Wang H
,
Liu L
,
Gou M
Citation(s)
33216286
,
33834024
Submission date
Dec 17, 2019
Last update date
Apr 13, 2021
Contact name
wang hua song
E-mail(s)
[email protected]
Organization name
nankai university
Street address
Tianjin city, China
City
Tianjin
ZIP/Postal code
300071
Country
China
Platforms (2)
GPL21273
HiSeq X Ten (Mus musculus)
GPL23479
BGISEQ-500 (Mus musculus)
Samples (135)
Less...
More...
GSM4221708
WT_PGC (whs v17)
GSM4221709
T2KO_PGC (whs v17)
GSM4221710
Young_WT_T1481 (whs v17)
GSM4221711
Young_WT_T1482 (whs v17)
GSM4221712
Young_WT_T1483 (whs v17)
GSM4221713
Young_WT_T1484 (whs v17)
GSM4221714
Young_WT_T1485 (whs v17)
GSM4221715
Young_WT_T1486 (whs v17)
GSM4221716
Young_WT_T1487 (whs v17)
GSM4221717
Young_WT_T1488 (whs v17)
GSM4221718
Young_WT_T2111 (whs v17)
GSM4221719
Young_WT_T2112 (whs v17)
GSM4221720
Young_WT_T2113 (whs v17)
GSM4221721
Young_WT_T2114 (whs v17)
GSM4221722
Young_WT_T2115 (whs v17)
GSM4221723
Young_WT_T2116 (whs v17)
GSM4221724
Young_WT_T2117 (whs v17)
GSM4221725
Young_WT_T2118 (whs v17)
GSM4221726
Young_WT_T2311 (whs v17)
GSM4221727
Young_WT_T2312 (whs v17)
GSM4221728
Young_WT_T2313 (whs v17)
GSM4221729
Young_WT_T2314 (whs v17)
GSM4221730
Young_WT_T2315 (whs v17)
GSM4221731
Young_WT_T2316 (whs v17)
GSM4221732
Young_WT_T2317 (whs v17)
GSM4221733
Young_WT_T2318 (whs v17)
GSM4221734
Young_Tet1-/-_T1461 (whs v17)
GSM4221735
Young_Tet1-/-_T1462 (whs v17)
GSM4221736
Young_Tet1-/-_T1463 (whs v17)
GSM4221737
Young_Tet1-/-_T1464 (whs v17)
GSM4221738
Young_Tet1-/-_T1465 (whs v17)
GSM4221739
Young_Tet1-/-_T1466 (whs v17)
GSM4221740
Young_Tet1-/-_T1467 (whs v17)
GSM4221741
Young_Tet1-/-_T1468 (whs v17)
GSM4221742
Young_Tet2-/-_T2131 (whs v17)
GSM4221743
Young_Tet2-/-_T2132 (whs v17)
GSM4221744
Young_Tet2-/-_T2133 (whs v17)
GSM4221745
Young_Tet2-/-_T2134 (whs v17)
GSM4221746
Young_Tet2-/-_T2135 (whs v17)
GSM4221747
Young_Tet2-/-_T2136 (whs v17)
GSM4221748
Young_Tet2-/-_T2137 (whs v17)
GSM4221749
Young_Tet2-/-_T2138 (whs v17)
GSM4221750
Young_Tet2-/-_T2141 (whs v17)
GSM4221751
Young_Tet2-/-_T2142 (whs v17)
GSM4221752
Young_Tet2-/-_T2143 (whs v17)
GSM4221753
Young_Tet2-/-_T2144 (whs v17)
GSM4221754
Young_Tet2-/-_T2145 (whs v17)
GSM4221755
Young_Tet2-/-_T2146 (whs v17)
GSM4221756
Young_Tet2-/-_T2147 (whs v17)
GSM4221757
Young_Tet2-/-_T2148 (whs v17)
GSM4221758
Young_WT__246_1_ATCACGTT (whs v17)
GSM4221759
Young_WT__246_2_CGATGTTT (whs v17)
GSM4221760
Young_WT__246_3_TTAGGCAT (whs v17)
GSM4221761
Young_WT__246_4_TGACCACT (whs v17)
GSM4221762
Young_WT__246_5_ACAGTGGT (whs v17)
GSM4221763
Young_WT__246_6_GCCAATGT (whs v17)
GSM4221764
Young_WT__246_7_CAGATCTG (whs v17)
GSM4221765
Young_WT__246_8_ACTTGATG (whs v17)
GSM4221766
Young_WT__246_10_TAGCTTGT (whs v17)
GSM4221767
Young_WT__246_11_GGCTACAG (whs v17)
GSM4221768
Young_WT__246_12_CTTGTACT (whs v17)
GSM4221769
Young_WT__246_13_TGGTTGTT (whs v17)
GSM4221770
Young_WT__246_14_TCTCGGTT (whs v17)
GSM4221771
Young_WT__246_15_TAAGCGTT (whs v17)
GSM4221772
Young_Tet1-/-_201_1_TGTACCTT (whs v17)
GSM4221773
Young_Tet1-/-_201_2_TTCTGTGT (whs v17)
GSM4221774
Young_Tet1-/-_201_3_TCTGCTGT (whs v17)
GSM4221775
Young_Tet1-/-_201_4_TTGGAGGT (whs v17)
GSM4221776
Young_Tet1-/-_201_6_TGATACGT (whs v17)
GSM4221777
Young_Tet1-/-_201_7_TGCATAGT (whs v17)
GSM4221778
Young_Tet1-/-_201_8_TTGACTCT (whs v17)
GSM4221779
Old_WT_365_1_TCGAAGTG (whs v17)
GSM4221780
Old_WT_365_2_TAACGCTG (whs v17)
GSM4221781
Old_WT_365_3_TTGGTATG (whs v17)
GSM4221782
Old_WT_365_4_TGAACTGG (whs v17)
GSM4221783
Old_WT_365_5_TACTTCGG (whs v17)
GSM4221784
Old_WT_247_1_TCTCACGG (whs v17)
GSM4221785
Old_WT_247_2_TCAGGAGG (whs v17)
GSM4221786
Old_WT_247_3_TAAGTTCG (whs v17)
GSM4221787
Old_WT_247_4_TCCAGTCG (whs v17)
GSM4221788
Old_WT_247_5_TGTATGCG (whs v17)
GSM4221789
Old_WT_247_6_TCATTGAG (whs v17)
GSM4221790
Old_WT_247_7_TGGCTCAG (whs v17)
GSM4221791
Old_Tet1-/-_209_2_TTCCTGCT (whs v17)
GSM4221792
Old_Tet1-/-_209_3_TAGTGACT (whs v17)
GSM4221793
Old_Tet1-/-_209_4_TACAGGAT (whs v17)
GSM4221794
Old_Tet1-/-_209_6_TGTGGTTG (whs v17)
GSM4221795
Old_Tet1-/-_209_7_TACTAGTC (whs v17)
GSM4221796
Old_Tet1-/-_315_1_TTCCATTG (whs v17)
GSM4221797
Old_Tet2-/-_S1612 (whs v17)
GSM4221798
Old_Tet2-/-_S1613 (whs v17)
GSM4221799
Old_Tet2-/-_S1614 (whs v17)
GSM4221800
Old_Tet2-/-_S1615 (whs v17)
GSM4221801
Old_Tet2-/-_S1616 (whs v17)
GSM4221802
Old_Tet2-/-_S1617 (whs v17)
GSM4221803
Old_Tet2-/-_S1618 (whs v17)
GSM4221804
Young_WT__246_1_ATCACGTT (whs v16)
GSM4221805
Young_WT__246_2_CGATGTTT (whs v16)
GSM4221806
Young_WT__246_3_TTAGGCAT (whs v16)
GSM4221807
Young_WT__246_4_TGACCACT (whs v16)
GSM4221808
Young_WT__246_5_ACAGTGGT (whs v16)
GSM4221809
Young_WT__246_6_GCCAATGT (whs v16)
GSM4221810
Young_WT__246_7_CAGATCTG (whs v16)
GSM4221811
Young_WT__246_8_ACTTGATG (whs v16)
GSM4221812
Young_WT__246_10_TAGCTTGT (whs v16)
GSM4221813
Young_WT__246_11_GGCTACAG (whs v16)
GSM4221814
Young_WT__246_12_CTTGTACT (whs v16)
GSM4221815
Young_WT__246_13_TGGTTGTT (whs v16)
GSM4221816
Young_WT__246_14_TCTCGGTT (whs v16)
GSM4221817
Young_WT__246_15_TAAGCGTT (whs v16)
GSM4221818
Young_Tet1-/-_201_1_TGTACCTT (whs v16)
GSM4221819
Young_Tet1-/-_201_2_TTCTGTGT (whs v16)
GSM4221820
Young_Tet1-/-_201_3_TCTGCTGT (whs v16)
GSM4221821
Young_Tet1-/-_201_4_TTGGAGGT (whs v16)
GSM4221822
Young_Tet1-/-_201_6_TGATACGT (whs v16)
GSM4221823
Young_Tet1-/-_201_7_TGCATAGT (whs v16)
GSM4221824
Young_Tet1-/-_201_8_TTGACTCT (whs v16)
GSM4221825
Old_WT_365_1_TCGAAGTG (whs v16)
GSM4221826
Old_WT_365_2_TAACGCTG (whs v16)
GSM4221827
Old_WT_365_3_TTGGTATG (whs v16)
GSM4221828
Old_WT_365_4_TGAACTGG (whs v16)
GSM4221829
Old_WT_365_5_TACTTCGG (whs v16)
GSM4221830
Old_WT_247_1_TCTCACGG (whs v16)
GSM4221831
Old_WT_247_2_TCAGGAGG (whs v16)
GSM4221832
Old_WT_247_3_TAAGTTCG (whs v16)
GSM4221833
Old_WT_247_4_TCCAGTCG (whs v16)
GSM4221834
Old_WT_247_5_TGTATGCG (whs v16)
GSM4221835
Old_WT_247_6_TCATTGAG (whs v16)
GSM4221836
Old_WT_247_7_TGGCTCAG (whs v16)
GSM4221837
Old_Tet1-/-_209_2_TTCCTGCT (whs v16)
GSM4221838
Old_Tet1-/-_209_3_TAGTGACT (whs v16)
GSM4221839
Old_Tet1-/-_209_4_TACAGGAT (whs v16)
GSM4221840
Old_Tet1-/-_209_6_TGTGGTTG (whs v16)
GSM4221841
Old_Tet1-/-_209_7_TACTAGTC (whs v16)
GSM4221842
Old_Tet1-/-_315_1_TTCCATTG (whs v16)
Relations
BioProject
PRJNA596104
SRA
SRP237910
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE142163_WT_PGC-VS-T2KO_PGC.PossionDis_Method.GeneDiffExp.txt.gz
2.1 Mb
(ftp)
(http)
TXT
GSE142163_whs_v16.txt.gz
4.7 Mb
(ftp)
(http)
TXT
GSE142163_whs_v17.txt.gz
6.0 Mb
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
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