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Series GSE135409 Query DataSets for GSE135409
Status Public on Aug 06, 2019
Title Expression data from human foreskin fibroblast and human iduced pluripotent stem cell
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Pluripotent cells are important and unique because of unprecedently high proliferation and differentiation potentials. The state of pluripotency is robust enough to sustain years of uninterrupted proliferation in vitro, but, once lost, there is a significant barrier for differentiated cells to regain pluripotency. By now, reprogramming of somatic cells into a pluripotent state is unambiguously proven only for methods that necessarily involve ectopic expression or direct delivery of exogenous factors inside the cells. Molecular mechanisms that provide robustness to the state of pluripotency and sustain the barrier between pluripotent and differentiated cells are not fully understood.
We reprogrammed human foreskin fibroblasts into human induced pluripotent stem cells using CoMiP 4in1 plasmid without shRNA p53.
 
Overall design Human foreskin fibroblasts were reprogrammed into human induced pluripotent stem cells and both cell lines were grown until exponential growth phase. We then extracted mRNA for hybridization on Affymetrix microarrays.
 
Contributor(s) Sabatier P
Citation(s) 34772928
Submission date Aug 05, 2019
Last update date Dec 02, 2021
Contact name Pierre Sabatier
E-mail(s) [email protected]
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Chemistry I
Street address Solnavägen 9
City Solna
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (6)
GSM4007915 human foreskin fibroblast, biological replicate 1
GSM4007916 human foreskin fibroblast, biological replicate 2
GSM4007917 human foreskin fibroblast, biological replicate 3
Relations
BioProject PRJNA558777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135409_RAW.tar 150.4 Mb (http)(custom) TAR (of CEL)
GSE135409_averaged_processed_data.txt.gz 1.2 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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