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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 18, 2020 |
| Title |
Systemic approaches reveal anti-adipogenic signals at the onset of obesity–related inflammation in white adipose tissue |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
32157317 |
| |
| Submission date |
Jun 18, 2019 |
| Last update date |
Mar 25, 2020 |
| Contact name |
Federica Gilardi |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Lausanne
|
| Department |
CIG - Center of Integrative Genomics
|
| Street address |
Lausanne 1015
|
| City |
Lausanne |
| State/province |
Vaud |
| ZIP/Postal code |
1015 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (168)
|
| GSM3889226 |
vWAT, 1 week, control, rep 4 |
| GSM3889227 |
vWAT, 1 week, control, rep 5 |
| GSM3889228 |
vWAT, 1 week, control, rep 6 |
| GSM3889229 |
vWAT, 1 week, high fat diet, rep 1 |
| GSM3889230 |
vWAT, 1 week, high fat diet, rep 2 |
| GSM3889231 |
vWAT, 1 week, high fat diet, rep 3 |
| GSM3889232 |
vWAT, 1 week, high fat diet, rep 4 |
| GSM3889233 |
vWAT, 1 week, high fat diet, rep 5 |
| GSM3889234 |
vWAT, 1 week, high fat diet, rep 6 |
| GSM3889235 |
scWAT, 1 week, control, rep 1 |
| GSM3889236 |
scWAT, 1 week, control, rep 2 |
| GSM3889237 |
scWAT, 1 week, control, rep 3 |
| GSM3889238 |
scWAT, 1 week, control, rep 4 |
| GSM3889239 |
scWAT, 1 week, control, rep 5 |
| GSM3889240 |
scWAT, 1 week, control, rep 6 |
| GSM3889241 |
scWAT, 1 week, high fat diet, rep 1 |
| GSM3889242 |
scWAT, 1 week, high fat diet, rep 2 |
| GSM3889243 |
scWAT, 1 week, high fat diet, rep 3 |
| GSM3889244 |
scWAT, 1 week, high fat diet, rep 4 |
| GSM3889245 |
scWAT, 1 week, high fat diet, rep 5 |
| GSM3889246 |
scWAT, 1 week, high fat diet, rep 6 |
| GSM3889247 |
vWAT, 8 weeks, control, rep 1 |
| GSM3889248 |
vWAT, 8 weeks, control, rep 2 |
| GSM3889249 |
vWAT, 8 weeks, control, rep 3 |
| GSM3889250 |
vWAT, 8 weeks, control, rep 4 |
| GSM3889251 |
vWAT, 8 weeks, control, rep 5 |
| GSM3889252 |
vWAT, 8 weeks, control, rep 6 |
| GSM3889253 |
vWAT, 8 weeks, high fat diet, rep 1 |
| GSM3889254 |
vWAT, 8 weeks, high fat diet, rep 2 |
| GSM3889255 |
vWAT, 8 weeks, high fat diet, rep 3 |
| GSM3889256 |
vWAT, 8 weeks, high fat diet, rep 4 |
| GSM3889257 |
vWAT, 8 weeks, high fat diet, rep 5 |
| GSM3889258 |
vWAT, 8 weeks, high fat diet, rep 6 |
| GSM3889259 |
scWAT, 8 weeks, control, rep 1 |
| GSM3889260 |
scWAT, 8 weeks, control, rep 2 |
| GSM3889261 |
scWAT, 8 weeks, control, rep 3 |
| GSM3889262 |
scWAT, 8 weeks, control, rep 4 |
| GSM3889263 |
scWAT, 8 weeks, control, rep 5 |
| GSM3889264 |
scWAT, 8 weeks, control, rep 6 |
| GSM3889265 |
scWAT, 8 weeks, high fat diet, rep 1 |
| GSM3889266 |
scWAT, 8 weeks, high fat diet, rep 2 |
| GSM3889267 |
scWAT, 8 weeks, high fat diet, rep 3 |
| GSM3889268 |
scWAT, 8 weeks, high fat diet, rep 4 |
| GSM3889269 |
scWAT, 8 weeks, high fat diet, rep 5 |
| GSM3889270 |
scWAT, 8 weeks, high fat diet, rep 6 |
| GSM3889271 |
vWAT, 20 weeks, control, rep 1 |
| GSM3889272 |
vWAT, 20 weeks, control, rep 2 |
| GSM3889273 |
vWAT, 20 weeks, control, rep 3 |
| GSM3889274 |
vWAT, 20 weeks, control, rep 4 |
| GSM3889275 |
vWAT, 20 weeks, control, rep 5 |
| GSM3889276 |
vWAT, 20 weeks, control, rep 6 |
| GSM3889277 |
vWAT, 20 weeks, high fat diet, rep 1 |
| GSM3889278 |
vWAT, 20 weeks, high fat diet, rep 2 |
| GSM3889279 |
vWAT, 20 weeks, high fat diet, rep 3 |
| GSM3889280 |
vWAT, 20 weeks, high fat diet, rep 4 |
| GSM3889281 |
vWAT, 20 weeks, high fat diet, rep 5 |
| GSM3889282 |
vWAT, 20 weeks, high fat diet, rep 6 |
| GSM3889283 |
scWAT, 20 weeks, control, rep 1 |
| GSM3889284 |
scWAT, 20 weeks, control, rep 2 |
| GSM3889285 |
scWAT, 20 weeks, control, rep 3 |
| GSM3889286 |
scWAT, 20 weeks, control, rep 4 |
| GSM3889287 |
scWAT, 20 weeks, control, rep 5 |
| GSM3889288 |
scWAT, 20 weeks, control, rep 6 |
| GSM3889289 |
scWAT, 20 weeks, high fat diet, rep 1 |
| GSM3889290 |
scWAT, 20 weeks, high fat diet, rep 2 |
| GSM3889291 |
scWAT, 20 weeks, high fat diet, rep 3 |
| GSM3889292 |
scWAT, 20 weeks, high fat diet, rep 4 |
| GSM3889293 |
scWAT, 20 weeks, high fat diet, rep 5 |
| GSM3889294 |
scWAT, 20 weeks, high fat diet, rep 6 |
| GSM3890772 |
scWAT, 1 week, DNA input, control, rep 1 |
| GSM3890773 |
scWAT, 1 week, DNA input, control, rep 2 |
| GSM3890774 |
scWAT, 1 week, DNA input, high fat diet, rep 1 |
| GSM3890775 |
scWAT, 1 week, DNA input, high fat diet, rep 2 |
| GSM3890776 |
scWAT, 1 week, H3K27ac, control, rep 1 |
| GSM3890777 |
scWAT, 1 week, H3K27ac, control, rep 2 |
| GSM3890778 |
scWAT, 1 week, H3K27ac, high fat diet, rep 1 |
| GSM3890779 |
scWAT, 1 week, H3K27ac, high fat diet, rep 2 |
| GSM3890780 |
scWAT, 1 week, H3K4me1, control, rep 1 |
| GSM3890781 |
scWAT, 1 week, H3K4me1, control, rep 2 |
| GSM3890782 |
scWAT, 1 week, H3K4me1, high fat diet, rep 1 |
| GSM3890783 |
scWAT, 1 week, H3K4me1, high fat diet, rep 2 |
| GSM3890784 |
scWAT, 1 week, RNAPol-II,control, rep 1 |
| GSM3890785 |
scWAT, 1 week, RNAPol-II,control, rep 2 |
| GSM3890786 |
scWAT, 1 week, RNAPol-II, high fat diet, rep 1 |
| GSM3890787 |
scWAT, 1 week, RNAPol-II, high fat diet, rep 2 |
| GSM3890788 |
vWAT, 1 week, DNA input, control, rep 1 |
| GSM3890789 |
vWAT, 1 week, DNA input, control, rep 2 |
| GSM3890790 |
vWAT, 1 week, DNA input, high fat diet, rep 1 |
| GSM3890791 |
vWAT, 1 week, DNA input, high fat diet, rep 2 |
| GSM3890792 |
vWAT, 1 week, H3K27ac, control, rep 1 |
| GSM3890793 |
vWAT, 1 week, H3K27ac, control, rep 2 |
| GSM3890794 |
vWAT, 1 week, H3K27ac, high fat diet, rep 1 |
| GSM3890795 |
vWAT, 1 week, H3K27ac, high fat diet, rep 2 |
| GSM3890796 |
vWAT, 1 week, H3K4me1, control, rep 1 |
| GSM3890797 |
vWAT, 1 week, H3K4me1, control, rep 2 |
| GSM3890798 |
vWAT, 1 week, H3K4me1, high fat diet, rep 1 |
| GSM3890799 |
vWAT, 1 week, H3K4me1, high fat diet, rep 2 |
| GSM3890800 |
vWAT, 1 week, RNAPol-II,control, rep 1 |
| GSM3890801 |
vWAT, 1 week, RNAPol-II,control, rep 2 |
| GSM3890802 |
vWAT, 1 week, RNAPol-II, high fat diet, rep 1 |
| GSM3890803 |
vWAT, 1 week, RNAPol-II, high fat diet, rep 2 |
| GSM3890804 |
scWAT, 8 weeks, DNA input, control, rep 1 |
| GSM3890805 |
scWAT, 8 weeks, DNA input, control, rep 2 |
| GSM3890806 |
scWAT, 8 weeks, DNA input, high fat diet, rep 1 |
| GSM3890807 |
scWAT, 8 weeks, DNA input, high fat diet, rep 2 |
| GSM3890808 |
scWAT, 8 weeks, H3K27ac, control, rep 1 |
| GSM3890809 |
scWAT, 8 weeks, H3K27ac, control, rep 2 |
| GSM3890810 |
scWAT, 8 weeks, H3K27ac, high fat diet, rep 1 |
| GSM3890811 |
scWAT, 8 weeks, H3K27ac, high fat diet, rep 2 |
| GSM3890812 |
scWAT, 8 weeks, H3K4me1, control, rep 1 |
| GSM3890813 |
scWAT, 8 weeks, H3K4me1, control, rep 2 |
| GSM3890814 |
scWAT, 8 weeks, H3K4me1, high fat diet, rep 1 |
| GSM3890815 |
scWAT, 8 weeks, H3K4me1, high fat diet, rep 2 |
| GSM3890816 |
scWAT, 8 weeks, RNAPol-II,control, rep 1 |
| GSM3890817 |
scWAT, 8 weeks, RNAPol-II,control, rep 2 |
| GSM3890818 |
scWAT, 8 weeks, RNAPol-II, high fat diet, rep 1 |
| GSM3890819 |
scWAT, 8 weeks, RNAPol-II, high fat diet, rep 2 |
| GSM3890820 |
vWAT, 8 weeks, DNA input, control, rep 1 |
| GSM3890821 |
vWAT, 8 weeks, DNA input, control, rep 2 |
| GSM3890822 |
vWAT, 8 weeks, DNA input, high fat diet, rep 1 |
| GSM3890823 |
vWAT, 8 weeks, DNA input, high fat diet, rep 2 |
| GSM3890824 |
vWAT, 8 weeks, H3K27ac, control, rep 1 |
| GSM3890825 |
vWAT, 8 weeks, H3K27ac, control, rep 2 |
| GSM3890826 |
vWAT, 8 weeks, H3K27ac, high fat diet, rep 1 |
| GSM3890827 |
vWAT, 8 weeks, H3K27ac, high fat diet, rep 2 |
| GSM3890828 |
vWAT, 8 weeks, H3K4me1, control, rep 1 |
| GSM3890829 |
vWAT, 8 weeks, H3K4me1, control, rep 2 |
| GSM3890830 |
vWAT, 8 weeks, H3K4me1, high fat diet, rep 1 |
| GSM3890831 |
vWAT, 8 weeks, H3K4me1, high fat diet, rep 2 |
| GSM3890832 |
vWAT, 8 weeks, RNAPol-II,control, rep 1 |
| GSM3890833 |
vWAT, 8 weeks, RNAPol-II,control, rep 2 |
| GSM3890834 |
vWAT, 8 weeks, RNAPol-II, high fat diet, rep 1 |
| GSM3890835 |
vWAT, 8 weeks, RNAPol-II, high fat diet, rep 2 |
| GSM3890836 |
scWAT, 20 weeks, DNA input, control, rep 1 |
| GSM3890837 |
scWAT, 20 weeks, DNA input, control, rep 2 |
| GSM3890838 |
scWAT, 20 weeks, DNA input, high fat diet, rep 1 |
| GSM3890839 |
scWAT, 20 weeks, DNA input, high fat diet, rep 2 |
| GSM3890840 |
scWAT, 20 weeks, H3K27ac, control, rep 1 |
| GSM3890841 |
scWAT, 20 weeks, H3K27ac, control, rep 2 |
| GSM3890842 |
scWAT, 20 weeks, H3K27ac, high fat diet, rep 1 |
| GSM3890843 |
scWAT, 20 weeks, H3K27ac, high fat diet, rep 2 |
| GSM3890844 |
scWAT, 20 weeks, H3K4me1, control, rep 1 |
| GSM3890845 |
scWAT, 20 weeks, H3K4me1, control, rep 2 |
| GSM3890846 |
scWAT, 20 weeks, H3K4me1, high fat diet, rep 1 |
| GSM3890847 |
scWAT, 20 weeks, H3K4me1, high fat diet, rep 2 |
| GSM3890848 |
scWAT, 20 weeks, RNAPol-II,control, rep 1 |
| GSM3890849 |
scWAT, 20 weeks, RNAPol-II,control, rep 2 |
| GSM3890850 |
scWAT, 20 weeks, RNAPol-II, high fat diet, rep 1 |
| GSM3890851 |
scWAT, 20 weeks, RNAPol-II, high fat diet, rep 2 |
| GSM3890852 |
vWAT, 20 weeks, DNA input, control, rep 1 |
| GSM3890853 |
vWAT, 20 weeks, DNA input, control, rep 2 |
| GSM3890854 |
vWAT, 20 weeks, DNA input, high fat diet, rep 1 |
| GSM3890855 |
vWAT, 20 weeks, DNA input, high fat diet, rep 2 |
| GSM3890856 |
vWAT, 20 weeks, H3K27ac, control, rep 1 |
| GSM3890857 |
vWAT, 20 weeks, H3K27ac, control, rep 2 |
| GSM3890858 |
vWAT, 20 weeks, H3K27ac, high fat diet, rep 1 |
| GSM3890859 |
vWAT, 20 weeks, H3K27ac, high fat diet, rep 2 |
| GSM3890860 |
vWAT, 20 weeks, H3K4me1, control, rep 1 |
| GSM3890861 |
vWAT, 20 weeks, H3K4me1, control, rep 2 |
| GSM3890862 |
vWAT, 20 weeks, H3K4me1, high fat diet, rep 1 |
| GSM3890863 |
vWAT, 20 weeks, H3K4me1, high fat diet, rep 2 |
| GSM3890864 |
vWAT, 20 weeks, RNAPol-II,control, rep 1 |
| GSM3890865 |
vWAT, 20 weeks, RNAPol-II,control, rep 2 |
| GSM3890866 |
vWAT, 20 weeks, RNAPol-II, high fat diet, rep 1 |
| GSM3890867 |
vWAT, 20 weeks, RNAPol-II, high fat diet, rep 2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE132706 |
Systemic approaches reveal anti-adipogenic signals at the onset of obesity–related inflammation in white adipose tissue [RNA-seq] |
| GSE132726 |
Systemic approaches reveal anti-adipogenic signals at the onset of obesity–related inflammation in white adipose tissue [ChIP-seq] |
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| Relations |
| BioProject |
PRJNA549551 |
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