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Series GSE128080 Query DataSets for GSE128080
Status Public on Feb 04, 2020
Title RNA helicase DDX21 mediates nucleotide stress responses (ChIP-Seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The RNA helicase DDX21 acts as trancriptional sensor for nucleotide lowering
 
Overall design ChIP-seq analysis of DDX21 and CDK9 in human A375 melanoma cells treated with DMSO, 25 uMA77 1726 and 25uM A771726 plus nucleotides
 
Contributor(s) Santoriello C, Song Y
Citation(s) 32231306
Submission date Mar 10, 2019
Last update date May 05, 2020
Contact name Leonard Zon
E-mail(s) [email protected]
Organization name Boston Children's Hospital
Department Oncology/Hematology
Street address 1 Blackfan Circle
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (9)
GSM3664673 DDX21 Chip on DMSO treated cells
GSM3664674 CDK9 Chip on DMSO treated cells
GSM3664675 DDX21 Chip on A77 1726 treated cells
This SubSeries is part of SuperSeries:
GSE128086 RNA helicase DDX21 mediates nucleotide stress responses
Relations
BioProject PRJNA526366
SRA SRP188035

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128080_RAW.tar 780.0 Kb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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