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Series GSE120558 Query DataSets for GSE120558
Status Public on Nov 26, 2018
Title Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions
Organisms Homo sapiens; Mus musculus
Experiment type Methylation profiling by genome tiling array
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30478443
Submission date Sep 27, 2018
Last update date Mar 27, 2019
Contact name Duncan Sproul
Organization name University of Edinburgh
Department MRC Human Genetics Unit
Street address Crewe Road South
City Edinburgh
State/province Mid Lothian
ZIP/Postal code EH4 2XU
Country United Kingdom
 
Platforms (5)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL21145 Infinium MethylationEPIC
Samples (66)
GSM3400675 dnmt3a_overgrowth_1_blood
GSM3400676 dnmt3a_overgrowth_2_blood
GSM3400677 patient_2_blood
This SuperSeries is composed of the following SubSeries:
GSE120428 Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions (human Illumina methylation)
GSE120551 Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions (human fibroblast ChIP-seq)
GSE120553 Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions (human fibroblast RNAseq)
Relations
BioProject PRJNA493736

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120558_RAW.tar 13.1 Gb (http)(custom) TAR (of BED, BIGWIG, COV, IDAT, TXT)
SRA Run SelectorHelp
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