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GEO accession:
Series GSE113220
Query DataSets for GSE113220
Status
Public on Apr 18, 2018
Title
Epigenetic changes induced by Bacteroides fragilis toxin (BFT)
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30885929
Submission date
Apr 16, 2018
Last update date
Mar 27, 2019
Contact name
Winston Timp
E-mail(s)
[email protected]
Phone
410-417-8467
Organization name
Johns Hopkins University
Department
Biomedical Engineering
Lab
Timp Lab
Street address
3400 N. Charles St. Clark 102A
City
Baltimore
State/province
MD
ZIP/Postal code
21218
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (24)
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GSM3100482
24hr Baseline rep 1 [ChIP-seq]
GSM3100483
24hr Baseline rep 2 [ChIP-seq]
GSM3100484
24hr Baseline rep 3 [ChIP-seq]
GSM3100485
24hr BFT2 rep 1 [ChIP-seq]
GSM3100486
24hr BFT2 rep 2 [ChIP-seq]
GSM3100487
24hr BFT2 rep 3 [ChIP-seq]
GSM3100488
48hr Baseline rep 1 [ChIP-seq]
GSM3100489
48hr Baseline rep 2 [ChIP-seq]
GSM3100490
48hr Baseline rep 3 [ChIP-seq]
GSM3100491
48hr BFT2 rep 1 [ChIP-seq]
GSM3100492
48hr BFT2 rep 2 [ChIP-seq]
GSM3100493
48hr BFT2 rep 3 [ChIP-seq]
GSM3102847
24hr Baseline rep 1 [RNA-seq]
GSM3102848
24hr Baseline rep 2 [RNA-seq]
GSM3102849
24hr Baseline rep 3 [RNA-seq]
GSM3102850
24hr BFT2 rep 1 [RNA-seq]
GSM3102851
24hr BFT2 rep 2 [RNA-seq]
GSM3102852
24hr BFT2 rep 3 [RNA-seq]
GSM3102853
48hr Baseline rep 1 [RNA-seq]
GSM3102854
48hr Baseline rep 2 [RNA-seq]
GSM3102855
48hr Baseline rep 3 [RNA-seq]
GSM3102856
48hr BFT2 rep 1 [RNA-seq]
GSM3102857
48hr BFT2 rep 2 [RNA-seq]
GSM3102858
48hr BFT2 rep 3 [RNA-seq]
This SuperSeries is composed of the following SubSeries:
GSE113218
Epigenetic changes induced by Bacteroides fragilis toxin (BFT) [RNA-seq]
GSE113219
Epigenetic changes induced by Bacteroides fragilis toxin (BFT) [ATAC-seq]
Relations
BioProject
PRJNA450439
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Supplementary file
Size
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File type/resource
GSE113220_RAW.tar
29.1 Mb
(http)
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TAR (of TSV)
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