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| Status |
Public on Jul 03, 2019 |
| Title |
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [Bisulfite-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
To understand the molecular differences between adipocytes and their contribution to cell-type specific function, we comprehensively characterised the transcriptomes and DNA methylomes using WGBS of isolated adipocytes from the SAT and VAT from normal weight individuals
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| Overall design |
WGBS, RNA-seq, and microarrays were used to study epigenetics and transcriptomics human cancer isolated subcutaneous (abdominal - SA) and vieceral (omental - VA) adipocyte, peripheral blood leukocytes (PBL) and visceral adipose tissue (VAT).
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| |
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| Contributor(s) |
Bradford ST |
| Citation(s) |
31266983 |
| |
| Submission date |
Mar 06, 2018 |
| Last update date |
Jul 26, 2019 |
| Contact name |
Stephen Bradford |
| Organization name |
Garvan Institute of Medical Research
|
| Street address |
384 Victoria St
|
| City |
Darlinghurst |
| State/province |
NSW |
| ZIP/Postal code |
2010 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE110821 |
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes |
|
| Relations |
| BioProject |
PRJNA437062 |
| SRA |
SRP133999 |
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