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| Status |
Public on Jul 01, 2018 |
| Title |
Effects of vitamin D on histone modifications H3K27ac and H3K4me3 in THP-1 cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Three independent repeats of ChIP-seq from THP-1 after 24h treatment with 1,25D or EtOH (control), using antibodies against histone markers H3K27ac and H3K4me3
|
| |
|
| Overall design |
THP-1 cells were treated with vitamin D or solvent (EtOH) for 24h before performing ChIP with antibodies against H3K27ac and H3K4me3 (3 repeat experiments with each antibody)
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| |
|
| Contributor(s) |
Nurminen V, Seuter S, Neme A, Carlberg C |
| Citation(s) |
30018005, 33753848 |
| |
| Submission date |
Dec 08, 2017 |
| Last update date |
Apr 06, 2021 |
| Contact name |
Carsten Carlberg |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Eastern Finland
|
| Department |
Institute of Biomedicine
|
| Street address |
Yliopistonranta 1D
|
| City |
Kuopio |
| ZIP/Postal code |
70211 |
| Country |
Finland |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (13)
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|
| Relations |
| BioProject |
PRJNA421715 |
| SRA |
SRP126403 |
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