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Status
Public on Oct 08, 2008
Title
Agilent-018972 D. melanogaster (FruitFly) Oligo Microarray 4x44K G2519F (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Drosophila melanogaster Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G2519F
Description
Submission date
Sep 12, 2008
Last update date
Apr 06, 2012
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (162)
GSM462174 , GSM462175 , GSM462176 , GSM462177 , GSM568689 , GSM568690
GSM568691 ,
GSM568692 ,
GSM568693 ,
GSM568694 ,
GSM593682 ,
GSM593683 ,
GSM593684 ,
GSM593685 ,
GSM593686 ,
GSM593687 ,
GSM593688 ,
GSM593689 ,
GSM707921 ,
GSM707922 ,
GSM707923 ,
GSM707924 ,
GSM707925 ,
GSM707926 ,
GSM707927 ,
GSM707928 ,
GSM744621 ,
GSM744622 ,
GSM744623 ,
GSM744624 ,
GSM744625 ,
GSM744626 ,
GSM744627 ,
GSM744628 ,
GSM765480 ,
GSM765481 ,
GSM765482 ,
GSM860032 ,
GSM860033 ,
GSM860034 ,
GSM860035 ,
GSM1125131 ,
GSM1125132 ,
GSM1125133 ,
GSM1125134 ,
GSM1125135 ,
GSM1125136 ,
GSM1125137 ,
GSM1163982 ,
GSM1163983 ,
GSM1163984 ,
GSM1163985 ,
GSM1187387 ,
GSM1187388 ,
GSM1187389 ,
GSM1187390 ,
GSM1426337 ,
GSM1426338 ,
GSM1426339 ,
GSM1426340 ,
GSM1426341 ,
GSM1426342 ,
GSM1495184 ,
GSM1495185 ,
GSM1495186 ,
GSM1495187 ,
GSM1495188 ,
GSM1495189 ,
GSM1495190 ,
GSM1495191 ,
GSM1495192 ,
GSM1495193 ,
GSM1495194 ,
GSM1495195 ,
GSM1495196 ,
GSM1495197 ,
GSM1495198 ,
GSM1495199 ,
GSM1495200 ,
GSM1495201 ,
GSM1495202 ,
GSM1495203 ,
GSM1495204 ,
GSM1495205 ,
GSM1495206 ,
GSM1495207 ,
GSM1495208 ,
GSM1495209 ,
GSM1495210 ,
GSM1495211 ,
GSM1495212 ,
GSM1495213 ,
GSM1495214 ,
GSM1495215 ,
GSM1495216 ,
GSM1495217 ,
GSM1495218 ,
GSM1495219 ,
GSM1495220 ,
GSM1495221 ,
GSM1495222 ,
GSM1495223 ,
GSM1495224 ,
GSM1495225 ,
GSM1495226 ,
GSM1495227 ,
GSM1495228 ,
GSM1495229 ,
GSM1495230 ,
GSM1495231 ,
GSM1495232 ,
GSM1495233 ,
GSM1495234 ,
GSM1495235 ,
GSM1495236 ,
GSM1495237 ,
GSM1495238 ,
GSM1495239 ,
GSM1495240 ,
GSM1495241 ,
GSM1495242 ,
GSM1495243 ,
GSM2473550 ,
GSM2473551 ,
GSM2473552 ,
GSM2473553 ,
GSM2473554 ,
GSM2473555 ,
GSM2534786 ,
GSM2534787 ,
GSM2534788 ,
GSM2534789 ,
GSM2534790 ,
GSM2534791 ,
GSM2534792 ,
GSM2534793 ,
GSM2631339 ,
GSM2631340 ,
GSM2631341 ,
GSM2631342 ,
GSM2631343 ,
GSM2631344 ,
GSM2631345 ,
GSM2631346 ,
GSM4820839 ,
GSM4820840 ,
GSM4820841 ,
GSM4820842 ,
GSM4820843 ,
GSM4820844 ,
GSM4820845 ,
GSM4820846 ,
GSM4820847 ,
GSM4820848 ,
GSM4820849 ,
GSM4820850 ,
GSM5907689 ,
GSM5907690 ,
GSM5907691 ,
GSM5907692 ,
GSM5907693 ,
GSM5907694 Series (20)
GSE18577 Drosophila 16-20 hrs embryos: DHR3G60S/Df(2R)12 vs. w1118
GSE23047 Expression profiling of DHR38-dependent transcripts in Drosophila larvae
GSE24123 Effects of purine de novo synthesis knockdown on gene expression in Drosophila melanogaster S2 tissue culture cells
GSE28604 8-miR cluster deletion affects mef2 levels in Drosophila melanogaster
GSE28605 Ectopic expression of mir-3 affects mef2 and tinman levels
GSE28614 Nautilus and muscle development
GSE30087 Microarray experiment to identify gene expression changes in response to Phenobarbital treatment and CncC overexpression in Drosophila.
GSE30850 X chromosome gene expression in D. melanogaster testes
GSE34997 Characterization of late-stage Drosophila grainy head IM-allele (grhIM) mutant embryos
GSE46154 Microarray gene expression profiling of isolated class I and class IV Drosophila dendritic arborization sensory neurons
GSE47979 In vivo determination of candidate direct targets of the nonsense mediated decay pathway in intact Drosophila
GSE48952 Microarray experment to identify genes differentially expressed in the DDT resistant 91R strain of Drosophila
GSE59084 Effects of caffeine ingestion in Drosophila melanogaster male thorax and abdomen.
GSE60985 Transcriptional profiling of Drosophila during Listeria infection as they die and as they recover upon ampicillin treatment
GSE94346 EC-tagging experiments
GSE96522 Analysis of genes regulated by neural activity in D. melanogaster
GSE99043 Analysis of IKKb (Ird5) regulated genes in control and hemizygote IKKb (Ird5) null mutant adult flies after DCV (Drosophila C virus) infection
GSE159170 Temperature dependence of the transcriptome in cultured Drosophila S2R+ cells
GSE159174 Effects of temperature change within the readily tolerated range on transcription and DNA accessibility in the Drosophila S2R+ cell line
GSE197058 Differential gene expression in Drosophila larval brain due to mutation in the Beadex gene
Relations Alternative to
GPL6385
Data table header descriptions ID Agilent feature number
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeq Accession number
GB_ACC GenBank Accession number
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE A_09_P000001
A_09_P000001
FALSE
NM_206326 NM_206326 2768971 CG33489
CG33489 gene product from transcript CG33489-RA
FBgn0053489
fly|FBtr0089525|ref|NM_206326|dgc|AT04621|gb|BT001271
chr3L:11567981-11567922
dm|3L68C13
CG33489 [Source:FlyBase;GeneId:FBgn0053489] [FBtr0089525]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
CATCTGTCGCACAGTTTCGTGCTGCAATGAACTGCGAAATGCATGCATCTACATAAAAAA
A_09_P000006
A_09_P000006
FALSE
NM_206325 NM_206325 2768970 CG33490
CG33490 gene product from transcript CG33490-RA
FBgn0053490
fly|FBtr0089526|ref|NM_206325|dgc|LP11159|gb|AY118618
chr3L:11566032-11565973
dm|3L68C13
CG33490 [Source:FlyBase;GeneId:FBgn0053490] [FBtr0089526]
GO:0005509(calcium ion binding)|GO:0005575(cellular_component)|GO:0008150(biological_process)
CGTTGCACAATTTCGTGCTCAGATGAAGAAGAACATTGAATCATAATTCAAGTTAGGTTT
A_09_P000016
A_09_P000016
FALSE
NM_206316 NM_206316 2768994 CG33493
CG33493 gene product from transcript CG33493-RA
FBgn0053493
fly|FBtr0089606|ref|NM_206316|dgc|MIP03833|gb|BT058064
chr3L:10685974-10685915
dm|3L67E7
CG33493 [Source:FlyBase;GeneId:FBgn0053493] [FBtr0089606]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
AGATACCAGGCCAAACTGCATCTACACCATGACTATAAGACCAATGCGTATCCCTCGTAA
A_09_P000021
A_09_P000021
FALSE
NM_206572 NM_206572 2768686 CG33494
CG33494 gene product from transcript CG33494-RA
FBgn0053494
fly|FBtr0089607|ref|NM_206572|dgc|LP10657|gb|BT003551
chr3R:21319396-21319337
dm|3R96E2
CG33494 [Source:FlyBase;GeneId:FBgn0053494] [FBtr0089607]
GTTTACTGAGTCAGAATCTTGGAGTCGCCATGATCAGTCGCATTGAAATATTTATTTTTA
A_09_P000026
A_09_P000026
FALSE
NM_206793 2768886 Sdic4
Sperm-specific dynein intermediate chain 4
FBgn0053499
fly|FBtr0089612|fly|FBtr0089610|fly|FBtr0089409|fly|FBtr0089408
chrX:20076167-20076108
dm|X19C1
CG33499 [Source:FlyBase;GeneId:FBgn0053499] [FBtr0089612]
CTGCAAAATTCTCTAGATGACCACAGTAACTGTACTAGAAGTTTTATTCAATGAAACTCG
A_09_P000031
A_09_P000031
FALSE
NM_206090 NM_206090 2768720 Cyp12d1-d
CG33503 gene product from transcript CG33503-RA
FBgn0053503
fly|FBtr0089418|fly|FBtr0089419|ref|NM_206090|ref|NM_136791
chr2R:7011435-7011376
dm|2R47D4
CG33503 [Source:FlyBase;GeneId:FBgn0053503] [FBtr0089418]
GO:0004497(monooxygenase activity)|GO:0005739(mitochondrion)|GO:0009055(electron carrier activity)|GO:0020037(heme binding)|GO:0055114(oxidation-reduction process)
ATGTTCCTCATGGAACCGGCCATTACGTTCCCCTTCAAATTCACGGATATCGAACAATAA
A_09_P000036
A_09_P000036
FALSE
NM_001014529 NM_001014529 3346176 U3-55K
U3 small nuclear riboprotein factor 55K
FBgn0053505
fly|FBtr0091445|ref|NM_001014529|dgc|LD17611|gb|AY118520
chr2R:10746482-10746423
dm|2R51C5
CG33505 [Source:FlyBase;GeneId:FBgn0053505] [FBtr0091445]
GO:0003729(mRNA binding)|GO:0006364(rRNA processing)|GO:0030532(small nuclear ribonucleoprotein complex)|GO:0034511(U3 snoRNA binding)
GCGCGGCCAGCAGTTAGGTTAACTTCTAAGCTTAAGTAAAGTTGTATAGTTTTTGTAACA
A_09_P000041
A_09_P000041
FALSE
NM_001014528 NM_001014528 3346177 CG33506
CG33506 gene product from transcript CG33506-RA
FBgn0053506
fly|FBtr0091446|ref|NM_001014528|dgc|RH47216|gb|BT031299
chr2R:10745041-10744982
dm|2R51C5
CG33506 [Source:FlyBase;GeneId:FBgn0053506] [FBtr0091446]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
GCGCAACAGCCTGAAACAGAGTAAACACACATTTATTGTTACATTTTTATTGCCGGTTGA
A_09_P000046
A_09_P000046
FALSE
NM_001169474 NM_001169474 3346227 dpr2
CG33507 gene product from transcript CG33507-RB
FBgn0261871
fly|FBtr0306116|fly|FBtr0306117|ref|NM_001169474|ref|NM_001014480
chr2L:10917839-10917780
dm|2L32B4
This gene is referred to in FlyBase by the symbol Dmel\dpr2 (CG33507, FBgn0261871). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Gene sequence location is 2L:10917139..10964128. [FBtr0306116]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
CATATCAATTATTGCAACCTGCGTGCGAAAATCACCAGCCACTTGAAGGAGCATCGATGT
A_09_P000051
A_09_P000051
FALSE
NM_001014495 NM_001014495 3346226 ppk13
pickpocket 13
FBgn0053508
fly|FBtr0091448|ref|NM_001014495|gb|AY226544|tc|TC229467
chr2L:21086959-21086900
dm|2L39A1
CG33508 [Source:FlyBase;GeneId:FBgn0053508] [FBtr0091448]
GO:0005272(sodium channel activity)|GO:0006814(sodium ion transport)|GO:0016020(membrane)
ACGTATATTAACGAGAAACGTCGACTAAAGCGATTGATTATACCCAAGAGATTTCAATGA
A_09_P000056
A_09_P000056
FALSE
NM_001014494 NM_001014494 3346225 CG33509
CG33509 gene product from transcript CG33509-RA
FBgn0053509
fly|FBtr0091449|ref|NM_001014494|dgc|IP21282|gb|BT032794
chr2L:21084786-21084727
dm|2L39A1
CG33509 [Source:FlyBase;GeneId:FBgn0053509] [FBtr0091449]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
AAACCCAGAATTCGCTACATATATGGAGGAGTGCTGTGTGGATGTCATGGAAATGGCCTT
A_09_P000061
A_09_P000061
FALSE
NM_001014493 NM_001014493 3346224 CG33510
CG33510 gene product from transcript CG33510-RB
FBgn0053510
fly|FBtr0300360|ref|NM_001014493
chr2L:21082948-21082889
dm|2L39A1
CG33510 [Source:FlyBase;GeneId:FBgn0053510] [FBtr0300360]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
GATTATATGTATGACTGTGTGGGTGACTTACTGGCACTGACATATCATAAACTACACTGA
A_09_P000066
A_09_P000066
FALSE
NM_001014492 NM_001014492 3346223 CG33511
CG33511 gene product from transcript CG33511-RA
FBgn0053511
fly|FBtr0091451|ref|NM_001014492|tc|NP1344415|tc|TC229706
chr2L:21081186-21081127
dm|2L39A1
CG33511 [Source:FlyBase;GeneId:FBgn0053511] [FBtr0091451]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
ATGACGCCTATCAGGGAACTGGTGGATTACCTCATGGAGAATGAGAATTTATATATTTAG
A_09_P000071
A_09_P000071
FALSE
NM_001014616 NM_001014616 3346160 dpr4
CG33512 gene product from transcript CG33512-RB
FBgn0053512
fly|FBtr0300491|fly|FBtr0300492|ref|NM_001014616|ref|NM_001170118
chr3R:7360325-7360266
dm|3R86E8
CG33512 [Source:FlyBase;GeneId:FBgn0053512] [FBtr0300491]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
ACATCAACTGGAACTGGAGCCCCGACTGGCGCTGGCACTGGAACCCTAAATGGAATTGGA
A_09_P000076
A_09_P000076
FALSE
AY616148 31107 Nmdar2
NMDA receptor 2
Dm.14391
gb|AY616148|gb|AY616145|gb|AY050491|gb|AY616144
chrX:1380321-1380255
dm|X2B1
Drosophila melanogaster NMDA receptor subunit 2-2 mRNA, complete cds. [AY616148]
GO:0004970(ionotropic glutamate receptor activity)|GO:0004972(N-methyl-D-aspartate selective glutamate receptor activity)|GO:0005234(extracellular-glutamate-gated ion channel activity)|GO:0006811(ion transport)|GO:0016020(membrane)|GO:0030288(outer membrane-bounded periplasmic space)
CAGAATCCAGAATCCACAATCCAGAATAAAGAACTAAGGCCAGATATGCAGCCCAGAAAA
A_09_P000081
A_09_P000081
FALSE
NM_001014558 NM_001014558 3346239 CG33514
CG33514 gene product from transcript CG33514-RA
FBgn0053514
fly|FBtr0091456|ref|NM_001014558|dgc|LP22879|gb|BT012303
chr3L:4366609-4366668
dm|3L64B2
CG33514 [Source:FlyBase;GeneId:FBgn0053514] [FBtr0091456]
GO:0008431(vitamin E binding)
GATAATATAGGAATACATGAATATGCTACGATACTTCGCAGCAGTTTTAGGTTTCTCCTA
A_09_P000086
A_09_P000086
FALSE
tc|TC224960
chr2L:14911994-14911935
dm|2L35B7
Rep: CG33515-PA - Drosophila melanogaster (Fruit fly), complete [TC224960]
GO:0003725(double-stranded RNA binding)|GO:0003779(actin binding)|GO:0005509(calcium ion binding)|GO:0005635(nuclear envelope)|GO:0005737(cytoplasm)|GO:0007010(cytoskeleton organization)|GO:0007015(actin filament organization)|GO:0007303(cytoplasmic transport, nurse cell to oocyte)|GO:0007498(mesoderm development)|GO:0008092(cytoskeletal protein binding)|GO:0008305(integrin complex)|GO:0008335(female germline ring canal stabilization)|GO:0015629(actin cytoskeleton)|GO:0030018(Z disc)|GO:0040023(establishment of nucleus localization)
TCCAAGTGGTCACCCAATGGCAATGTAAGTACACAAACATGCGATTGTTCCAGTGGGAAA
A_09_P000091
A_09_P000091
FALSE
NM_001014459 NM_001014459 3346208 dpr3
CG33516 gene product from transcript CG33516-RB
FBgn0053516
fly|FBtr0300671|ref|NM_001014459|dgc|RH14432|dgc|IP06940
chr2L:2066757-2066554
dm|2L22C2
CG33516 [Source:FlyBase;GeneId:FBgn0053516] [FBtr0300671]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0032234(regulation of calcium ion transport via store-operated calcium channel activity)
TCTGCATGATAAATCGGTATCCTGGATACGGAAACGTGATCTGCATATCCTGACTGTAGG
A_09_P000096
A_09_P000096
FALSE
NM_001014759 NM_001014759 33007 D2R
Dopamine 2-like receptor
FBgn0053517
fly|FBtr0070034|ref|NM_001014759|dgc|RE06088|gb|BT015236
chrX:19899034-19898975
dm|X19A4
CG33517 [Source:FlyBase;GeneId:FBgn0053517] [FBtr0070034]
GO:0001591(dopamine receptor activity, coupled via Gi/Go)|GO:0004930(G-protein coupled receptor activity)|GO:0004952(dopamine receptor activity)|GO:0007186(G-protein coupled receptor protein signaling pathway)|GO:0007212(dopamine receptor signaling pathway)|GO:0008227(G-protein coupled amine receptor activity)|GO:0016021(integral to membrane)
CTCTACCAATAAAGCATATATACGAGTTTGTAAGATAACTGGGGTGTAAGCGAAAATGAA
A_09_P000101
A_09_P000101
FALSE
NM_001014758 33007 D2R
Dopamine 2-like receptor
FBgn0053517
fly|FBtr0091461|fly|FBtr0100196|fly|FBtr0091462|fly|FBtr0070033
chrX:19901051-19900992
dm|X19A4
CG33517 [Source:FlyBase;GeneId:FBgn0053517] [FBtr0091461]
GO:0001591(dopamine receptor activity, coupled via Gi/Go)|GO:0004930(G-protein coupled receptor activity)|GO:0004952(dopamine receptor activity)|GO:0007186(G-protein coupled receptor protein signaling pathway)|GO:0007212(dopamine receptor signaling pathway)|GO:0008227(G-protein coupled amine receptor activity)|GO:0016021(integral to membrane)
TTATCAACGGCGAGCACGTCACCAGCAATAGTTATAGCAATAGGCAATTGGATGATGGGT
32237 13916 Kbytes .Supplementary data files not provided
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