GEO help: Mouse over screen elements for information.
Status
Public on Oct 08, 2008
Title
Agilent-012097 Human 1A Microarray (V2) G4110B (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4110B
Description
Submission date
Sep 09, 2008
Last update date
Apr 06, 2012
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (1665)
GSM349655 , GSM349656 , GSM349657 , GSM349658 , GSM349659 , GSM349660
GSM349661 ,
GSM349662 ,
GSM349663 ,
GSM349664 ,
GSM349665 ,
GSM349666 ,
GSM349667 ,
GSM349668 ,
GSM349669 ,
GSM349670 ,
GSM349671 ,
GSM349672 ,
GSM349673 ,
GSM349674 ,
GSM349675 ,
GSM349676 ,
GSM349677 ,
GSM349678 ,
GSM377102 ,
GSM377108 ,
GSM377109 ,
GSM377111 ,
GSM377112 ,
GSM377113 ,
GSM377115 ,
GSM377116 ,
GSM377117 ,
GSM377119 ,
GSM377120 ,
GSM377121 ,
GSM377122 ,
GSM377123 ,
GSM377124 ,
GSM377125 ,
GSM377126 ,
GSM377127 ,
GSM377128 ,
GSM377138 ,
GSM377142 ,
GSM377143 ,
GSM378266 ,
GSM378267 ,
GSM378268 ,
GSM378269 ,
GSM378270 ,
GSM378271 ,
GSM378272 ,
GSM378273 ,
GSM378274 ,
GSM378275 ,
GSM378276 ,
GSM378277 ,
GSM378278 ,
GSM378279 ,
GSM378280 ,
GSM378281 ,
GSM378282 ,
GSM378283 ,
GSM378284 ,
GSM378285 ,
GSM378286 ,
GSM378287 ,
GSM378288 ,
GSM378289 ,
GSM378290 ,
GSM378291 ,
GSM378292 ,
GSM378293 ,
GSM378294 ,
GSM378295 ,
GSM378296 ,
GSM378297 ,
GSM378298 ,
GSM378299 ,
GSM378300 ,
GSM378301 ,
GSM378302 ,
GSM378303 ,
GSM378304 ,
GSM378305 ,
GSM378306 ,
GSM378307 ,
GSM378308 ,
GSM378309 ,
GSM378310 ,
GSM378311 ,
GSM378312 ,
GSM378313 ,
GSM378314 ,
GSM378315 ,
GSM378316 ,
GSM378317 ,
GSM378318 ,
GSM378319 ,
GSM378320 ,
GSM378321 ,
GSM378322 ,
GSM378323 ,
GSM378324 ,
GSM378325 ,
GSM378326 ,
GSM378327 ,
GSM378328 ,
GSM378329 ,
GSM378330 ,
GSM378331 ,
GSM378332 ,
GSM378333 ,
GSM378334 ,
GSM378335 ,
GSM378336 ,
GSM378337 ,
GSM378338 ,
GSM378339 ,
GSM378340 ,
GSM378341 ,
GSM378342 ,
GSM378343 ,
GSM378344 ,
GSM378345 ,
GSM378346 ,
GSM378347 ,
GSM378348 ,
GSM378349 ,
GSM378350 ,
GSM378351 ,
GSM378352 ,
GSM378353 ,
GSM384939 ,
GSM384966 ,
GSM384967 ,
GSM384968 ,
GSM384969 ,
GSM384970 ,
GSM384971 ,
GSM384972 ,
GSM384973 ,
GSM384974 ,
GSM384975 ,
GSM384976 ,
GSM384977 ,
GSM384978 ,
GSM384979 ,
GSM384980 ,
GSM384981 ,
GSM384982 ,
GSM384983 ,
GSM384984 ,
GSM384985 ,
GSM384986 ,
GSM384987 ,
GSM384988 ,
GSM384989 ,
GSM384990 ,
GSM384991 ,
GSM384992 ,
GSM384993 ,
GSM384994 ,
GSM384995 ,
GSM384996 ,
GSM384997 ,
GSM384998 ,
GSM384999 ,
GSM385000 ,
GSM460954 ,
GSM460955 ,
GSM460956 ,
GSM460957 ,
GSM460958 ,
GSM460959 ,
GSM460960 ,
GSM460961 ,
GSM460962 ,
GSM460963 ,
GSM460964 ,
GSM460965 ,
GSM460966 ,
GSM460967 ,
GSM460968 ,
GSM460969 ,
GSM460970 ,
GSM460971 ,
GSM460972 ,
GSM460973 ,
GSM460974 ,
GSM460975 ,
GSM460976 ,
GSM460977 ,
GSM460978 ,
GSM460979 ,
GSM460980 ,
GSM460981 ,
GSM460982 ,
GSM460983 ,
GSM460984 ,
GSM460985 ,
GSM460986 ,
GSM460987 ,
GSM460988 ,
GSM460989 ,
GSM460990 ,
GSM460991 ,
GSM460992 ,
GSM460993 ,
GSM460994 ,
GSM460995 ,
GSM460996 ,
GSM460997 ,
GSM460998 ,
GSM460999 ,
GSM461000 ,
GSM461001 ,
GSM461002 ,
GSM461003 ,
GSM461004 ,
GSM555895 ,
GSM555896 ,
GSM555897 ,
GSM555898 ,
GSM555899 ,
GSM555900 ,
GSM587275 ,
GSM587276 ,
GSM587277 ,
GSM587278 ,
GSM587279 ,
GSM587280 ,
GSM587281 ,
GSM587282 ,
GSM591890 ,
GSM591891 ,
GSM591892 ,
GSM591893 ,
GSM591894 ,
GSM591895 ,
GSM591896 ,
GSM591897 ,
GSM591898 ,
GSM591899 ,
GSM591900 ,
GSM591901 ,
GSM591902 ,
GSM591903 ,
GSM591904 ,
GSM591905 ,
GSM591906 ,
GSM591907 ,
GSM591908 ,
GSM591909 ,
GSM591910 ,
GSM591911 ,
GSM591912 ,
GSM591913 ,
GSM591914 ,
GSM591915 ,
GSM591916 ,
GSM591917 ,
GSM591918 ,
GSM591919 ,
GSM591920 ,
GSM591921 ,
GSM591922 ,
GSM591923 ,
GSM591924 ,
GSM591925 ,
GSM591926 ,
GSM591927 ,
GSM591928 ,
GSM591929 ,
GSM591930 ,
GSM591931 ,
GSM591932 ,
GSM591933 ,
GSM591934 ,
GSM591935 ,
GSM591936 ,
GSM591937 ,
GSM591938 ,
GSM591939 ,
GSM591940 ,
GSM591941 ,
GSM591942 ,
GSM591943 ,
GSM591944 ,
GSM591945 ,
GSM591946 ,
GSM591947 ,
GSM591948 ,
GSM591949 ,
GSM591950 ,
GSM591951 ,
GSM591952 ,
GSM591953 ,
GSM591954 ,
GSM591955 ,
GSM591956 ,
GSM591957 ,
GSM591958 ,
GSM591959 ,
GSM591960 ,
GSM591961 ,
GSM591962 ,
GSM591963 ,
GSM591964 ,
GSM591965 ,
GSM591966 ,
GSM591967 ,
GSM591968 ,
GSM591969 ,
GSM712020 ,
GSM712021 ,
GSM712022 ,
GSM712023 ,
GSM712024 ,
GSM712025 ,
GSM712026 ,
GSM712027 ,
GSM712028 ,
GSM712029 ,
GSM712030 ,
GSM712031 ,
GSM712032 ,
GSM712033 ,
GSM712034 ,
GSM712035 ,
GSM712036 ,
GSM712037 ,
GSM712038 ,
GSM712039 ,
GSM712040 ,
GSM712041 ,
GSM712042 ,
GSM712043 ,
GSM712044 ,
GSM712045 ,
GSM712046 ,
GSM712047 ,
GSM712048 ,
GSM712049 ,
GSM712050 ,
GSM712051 ,
GSM712052 ,
GSM712053 ,
GSM712054 ,
GSM712055 ,
GSM712056 ,
GSM712057 ,
GSM712058 ,
GSM712059 ,
GSM712060 ,
GSM712061 ,
GSM712062 ,
GSM712063 ,
GSM712066 ,
GSM712067 ,
GSM712068 ,
GSM712069 ,
GSM712070 ,
GSM712071 ,
GSM796413 ,
GSM796414 ,
GSM796415 ,
GSM796416 ,
GSM819509 ,
GSM819510 ,
GSM819511 ,
GSM819512 ,
GSM838826 ,
GSM838827 ,
GSM838828 ,
GSM838829 ,
GSM838830 ,
GSM838831 ,
GSM838832 ,
GSM838833 ,
GSM838834 ,
GSM838835 ,
GSM838836 ,
GSM838837 ,
GSM838838 ,
GSM838839 ,
GSM838840 ,
GSM838841 ,
GSM838842 ,
GSM838843 ,
GSM838844 ,
GSM838845 ,
GSM838846 ,
GSM838847 ,
GSM838848 ,
GSM838849 ,
GSM838850 ,
GSM838851 ,
GSM838852 ,
GSM838853 ,
GSM838854 ,
GSM838855 ,
GSM838856 ,
GSM838857 ,
GSM838858 ,
GSM838859 ,
GSM838860 ,
GSM838861 ,
GSM838862 ,
GSM838863 ,
GSM838864 ,
GSM838865 ,
GSM838866 ,
GSM838867 ,
GSM838868 ,
GSM838869 ,
GSM838870 ,
GSM838871 ,
GSM838872 ,
GSM838873 ,
GSM838874 ,
GSM838875 ,
GSM838876 ,
GSM872434 ,
GSM872435 ,
GSM872436 ,
GSM872437 ,
GSM872438 ,
GSM872439 ,
GSM872440 ,
GSM872441 ,
GSM872442 ,
GSM872443 ,
GSM872444 ,
GSM872445 ,
GSM872446 ,
GSM872447 ,
GSM872448 ,
GSM872449 ,
GSM872450 ,
GSM872451 ,
GSM872452 ,
GSM872453 ,
GSM872454 ,
GSM872455 ,
GSM872456 ,
GSM872457 ,
GSM872458 ,
GSM872459 ,
GSM872460 ,
GSM872461 ,
GSM872462 ,
GSM872463 ,
GSM872464 ,
GSM872465 ,
GSM872466 ,
GSM872467 ,
GSM872468 ,
GSM872469 ,
GSM872470 ,
GSM872471 ,
GSM872472 ,
GSM872473 ,
GSM872474 ,
GSM872475 ,
GSM872476 ,
GSM872477 ,
GSM872478 ,
GSM872479 ,
GSM872480 ,
GSM872481 ,
GSM872482 ,
GSM872483 ,
GSM872484 ,
GSM872485 ,
GSM872486 ,
GSM872487 ,
GSM872488 ,
GSM872489 ,
GSM872490 ,
GSM872491 ,
GSM872492 ,
GSM872493 ,
GSM872494 ,
GSM872495 ,
GSM872496 ,
GSM872497 ,
GSM872498 ,
GSM872499 ,
GSM872500 ,
GSM872501 ,
GSM872502 ,
GSM872503 ,
GSM872504 ,
GSM872505 ,
GSM872506 ,
GSM872507 ,
GSM872508 ,
GSM872509 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (26)
GSE13879 N-Tera2 differentiated human neuronal model: Mock infected vs HCoV-OC43 infected
GSE14860 Integrated genomic profiling of endometrial carcinoma
GSE15158 Peripheral blood transcriptomics_Human_Single supratherapeutic dose of acetaminophen
GSE15327 Global Gene Expression Analysis Reveals Differences in Cellular Responses to Hydroxyl- and Superoxide Anion Radical-...
GSE18496 Breast Cell Lines: Experimental vs. Mixed Reference
GSE22329 Innate signature induced in human mDCs by dengue vaccine candidates
GSE23812 Gene expression along the human epididymis
GSE24060 Peripheral Blood Cells Gene Expression Profiles from Discordant Monozygotic Twins with Systemic Autoimmune disease (SAIDs)
GSE28739 Gene expression patterns of chemoresistant and chemosensitive serous epithelial ovarian tumors with possible predictive value in response to initial chemotherapy
GSE32127 Peripheral blood mononuclear cells, control vs. Kashin-Beck Disease
GSE33095 Identification of Prognostic Genes for Recurrent Risk Prediction in Triple Negative Breast Cancer Patients in Taiwan
GSE33926 Molecular characteristics and metastasis predictor genes of triple-negative breast cancer
GSE34798 Early transcriptional programming links progression to hepatitis C virus-induced severe liver disease in transplant patients
GSE36097 CD99 triggering induces a novel processes of death in Ewing's sarcoma cells involving reactivation of p53 functions and RAS upregulation.
GSE39072 CD99 suppresses osteosarcoma cell migration by favouring the oncosuppressor N-cadherin/ B-catenin signalling pathway in contrast to ezrin: the central role of ROCK2
GSE43567 Baseline NSCLC cell lines compared to a reference mix consisting of 45 NSCLC cell lines
GSE45849 Gene expressioin signatures in human lymphoblastoid cell lines with different ataxia telangiectasia-mutated (ATM) genotypes post sham- or IR-treatment
GSE45850 Gene expression signatures but not cell cycle checkpoint functions distinguish AT carriers from normal individuals and AT patients
GSE47996 human epidermoid carcinoma cell: Control (A431-P cells) vs. highly invasive subline (A431-III cells)
GSE51088 Ovarian Tumor Samples: mixed reference of 106 pooled ovarian samples vs. individual patient ovarian sample
GSE53752 Molecular characteristics and metastasis predictor genes of triple-negative breast cancer (II)
GSE70774 Blood Gene Expression Profiling of an Early Acetaminophen Response
GSE70784 Blood Gene Expression Profiling of an Early Acetaminophen Response (I)
GSE70786 Blood Gene Expression Profiling of an Early Acetaminophen Response (II)
GSE77858 Molecular subtypes in pancreatic adenocarcinoma [tumors, normal and pancreatitis]
GSE77859 Molecular subtypes in pancreatic adenocarcinoma
Relations Alternative to
GPL887
Data table header descriptions ID Agilent feature number
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeq Accession number
GB_ACC GenBank Accession number
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE A_23_P100001
A_23_P100001
FALSE
NM_207446 NM_207446 400451 FAM174B
family with sequence similarity 174, member B"
Hs.27373
ENST00000327355
THC2462674
ref|NM_207446|ens|ENST00000327355|gb|CR606671|gb|AK075564
chr15:90961852-90961793
hs|15q26.1
Homo sapiens family with sequence similarity 174, member B (FAM174B), mRNA [NM_207446]
GO:0016020(membrane)|GO:0016021(integral to membrane)
ATCTCATGGAAAAGCTGGATTCCTCTGCCTTACGCAGAAACACCCGGGCTCCATCTGCCA
A_23_P100011
A_23_P100011
FALSE
NM_005829 NM_005829 10239 AP3S2
adaptor-related protein complex 3, sigma 2 subunit"
Hs.632161
ENST00000336418
NP1208528
ref|NM_005829|ref|NR_023361|ens|ENST00000336418|gb|AK222698
chr15:88179747-88179688
hs|15q26.1
Homo sapiens adaptor-related protein complex 3, sigma 2 subunit (AP3S2), mRNA [NM_005829]
GO:0005515(protein binding)|GO:0005794(Golgi apparatus)|GO:0006886(intracellular protein transport)|GO:0008565(protein transporter activity)|GO:0016020(membrane)|GO:0016192(vesicle-mediated transport)|GO:0030117(membrane coat)|GO:0030659(cytoplasmic vesicle membrane)|GO:0031410(cytoplasmic vesicle)
TCAAGTATTGGCCTGACATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
A_23_P10002
A_23_P10002
FALSE
NM_025180 NM_025180 80254 CEP63
centrosomal protein 63kDa
Hs.443301
ENST00000337090
THC2478602
ref|NM_025180|ref|NM_001042383|ref|NM_001042400|ens|ENST00000337090
chr3:135762950-135763009
hs|3q22.2
Homo sapiens centrosomal protein 63kDa (CEP63), transcript variant 1, mRNA [NM_025180]
GO:0005515(protein binding)|GO:0005813(centrosome)
ATTTTTGGAAGAGGAGGAACTGAGGTCTCATCACATTCTAGAGCGCTTGGATGCCCATAT
A_23_P100022
A_23_P100022
FALSE
NM_014848 NM_014848 9899 SV2B
synaptic vesicle glycoprotein 2B
Hs.21754
ENST00000330276
THC2464594
ref|NM_014848|ens|ENST00000330276|gb|AB018278|gb|BC030011
chr15:89639333-89639392
hs|15q26.1
Homo sapiens synaptic vesicle glycoprotein 2B (SV2B), mRNA [NM_014848]
GO:0001669(acrosome)|GO:0005215(transporter activity)|GO:0006836(neurotransmitter transport)|GO:0008021(synaptic vesicle)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0030054(cell junction)|GO:0031410(cytoplasmic vesicle)|GO:0045202(synapse)
ATGTCGGCTGTGGAGGGTTAAAGGGATGAGGCTTTCCTTTGTTTAGCAAATCTGTTCACA
A_23_P100033
A_23_P100033
FALSE
NM_001004719 NM_001004719 390538 OR4M2
olfactory receptor, family 4, subfamily M, member 2"
Hs.709063
ENST00000332663
THC2604959
ref|NM_001004719|ref|NM_001005500|ref|NR_015416|ens|ENST00000332663
chr15:19870171-19870230
hs|15q11.2
Homo sapiens olfactory receptor, family 4, subfamily M, member 2 (OR4M2), mRNA [NM_001004719]
GO:0004872(receptor activity)|GO:0004984(olfactory receptor activity)|GO:0005886(plasma membrane)|GO:0007165(signal transduction)|GO:0007186(G-protein coupled receptor protein signaling pathway)|GO:0007608(sensory perception of smell)|GO:0016021(integral to membrane)|GO:0050896(response to stimulus)
GCCCCTGAAATGCTCATAGACTTCTTTGTGGAGAGGAAGATAATTTCTTTTGATGGATGC
A_23_P100059
A_23_P100059
FALSE
NM_194272 NM_194272 348093 RBPMS2
RNA binding protein with multiple splicing 2
Hs.436518
ENST00000300069
THC2472982
ref|NM_194272|ens|ENST00000300069|gb|AK127873|gb|AK124123
chr15:62819488-62819429
hs|15q22.31
Homo sapiens RNA binding protein with multiple splicing 2 (RBPMS2), mRNA [NM_194272]
GO:0000166(nucleotide binding)|GO:0003676(nucleic acid binding)
TTATGCATCATAAAGGATTTTTCATGTGCGTACCATTAATTATTAAAGCGACCTCGTTCG
A_23_P100065
A_23_P100065
FALSE
NM_001038640 NM_001038640 342096 GOLGA6
golgi autoantigen, golgin subfamily a, 6"
Hs.546408
ENST00000300576
THC2651564
ref|NM_001038640|ref|NM_018652|gb|AF263742|ens|ENST00000300576
chr15:72150963-72150824
hs|15q24.1
Homo sapiens golgi autoantigen, golgin subfamily a, 6 (GOLGA6), mRNA [NM_001038640]
ATCGTGACAGACGGCATGAGAGAGTCCTTCACCGTATATGAAAGCCAGGGGGCAGTGCCA
A_23_P100074
A_23_P100074
FALSE
NM_020371 NM_020371 57099 AVEN
apoptosis, caspase activation inhibitor"
Hs.555966
ENST00000306730
THC2471512
ref|NM_020371|ens|ENST00000306730|gb|CR618548|gb|CR619789
chr15:31946031-31945972
hs|15q14
Homo sapiens apoptosis, caspase activation inhibitor (AVEN), mRNA [NM_020371]
GO:0005515(protein binding)|GO:0005622(intracellular)|GO:0005624(membrane fraction)|GO:0006915(apoptosis)|GO:0006916(anti-apoptosis)|GO:0012505(endomembrane system)|GO:0016020(membrane)
GACCAGCCAGTTTACAAGCATGTCTCAAGCTAGTGTGTTCCATTATGCTCACAGCAGTAA
A_23_P100088
A_23_P100088
FALSE
NM_002789 NM_002789 5685 PSMA4
proteasome (prosome, macropain) subunit, alpha type, 4"
Hs.251531
NP705869
ref|NM_002789|ref|NM_001102667|ref|NM_001102668|gb|BC005361
chr15:76628463-76628522
hs|15q25.1
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 4 (PSMA4), transcript variant 1, mRNA [NM_002789]
GO:0004298(threonine-type endopeptidase activity)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0005829(cytosol)|GO:0005839(proteasome core complex)|GO:0006511(ubiquitin-dependent protein catabolic process)|GO:0008233(peptidase activity)|GO:0031145(anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process)|GO:0042802(identical protein binding)|GO:0051436(negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle)|GO:0051437(positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle)
TGAATTGGGTCCTTGTCATTTCTGTCCAATTGAATACTTTATTGTAACGATGATGGTTAC
A_23_P100092
A_23_P100092
FALSE
NM_152455 NM_152455 146050 ZSCAN29
zinc finger and SCAN domain containing 29
Hs.418287
NP1457339
ref|NM_152455|gb|BC109270|gb|AK122788|gb|AK093377
chr15:41440680-41440621
hs|15q15.3
Homo sapiens zinc finger and SCAN domain containing 29 (ZSCAN29), mRNA [NM_152455]
GO:0003700(transcription factor activity)|GO:0005622(intracellular)|GO:0005634(nucleus)|GO:0006350(transcription)|GO:0006355(regulation of transcription, DNA-dependent)|GO:0008270(zinc ion binding)|GO:0046872(metal ion binding)
AGAGAAACCCTATGGGTGTCATGACTGTGGTAAGTGCTTCAGTAAAAGCTCTGCCCTTAA
A_23_P100103
A_23_P100103
FALSE
NM_015289 NM_015289 23339 VPS39
vacuolar protein sorting 39 homolog (S. cerevisiae)
Hs.88025
ENST00000348544
THC2782911
ref|NM_015289|ens|ENST00000348544|ens|ENST00000318006|gb|AF280814
chr15:40240319-40240260
hs|15q15.1
Homo sapiens vacuolar protein sorting 39 homolog (S. cerevisiae) (VPS39), mRNA [NM_015289]
GO:0005083(small GTPase regulator activity)|GO:0005515(protein binding)|GO:0005737(cytoplasm)|GO:0005765(lysosomal membrane)|GO:0005768(endosome)|GO:0015031(protein transport)|GO:0016020(membrane)|GO:0031902(late endosome membrane)
TGCATTTGCAAGATACCCCAATGGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAA
A_23_P100115
A_23_P100115
FALSE
NM_007236 NM_007236 11261 CHP
calcium binding protein P22
Hs.406234
ENST00000366273
NP1075687
ref|NM_007236|ens|ENST00000366273|ens|ENST00000334660|gb|CR542085
chr15:39358319-39358378
hs|15q15.1
Homo sapiens calcium binding protein P22 (CHP), mRNA [NM_007236]
GO:0005509(calcium ion binding)|GO:0005737(cytoplasm)|GO:0006813(potassium ion transport)|GO:0007264(small GTPase mediated signal transduction)|GO:0015459(potassium channel regulator activity)|GO:0043231(intracellular membrane-bounded organelle)
GACCATTCAGGAGGCTGATCAGGATGGGGACAGTGCCATATCTTTCACAGAATTTGTTAA
A_23_P100127
A_23_P100127
FALSE
NM_170589 NM_170589 57082 CASC5
cancer susceptibility candidate 5
Hs.181855
ENST00000260369
THC2474180
ref|NM_170589|ref|NM_144508|gb|AF248041|ens|ENST00000260369
chr15:38704817-38704876
hs|15q15.1
Homo sapiens cancer susceptibility candidate 5 (CASC5), transcript variant 1, mRNA [NM_170589]
GO:0001669(acrosome)|GO:0001675(acrosome formation)|GO:0005515(protein binding)|GO:0005634(nucleus)
CGGTCTCTAGCAAAGATTCAGGCATTGGATCTGTTGCAGGTAAACTGAACCTAAGTCCTT
A_23_P100133
A_23_P100133
FALSE
NM_015251 NM_015251 23300 ATMIN
ATM interactor
Hs.16349
ENST00000299575
THC2468116
ref|NM_015251|ens|ENST00000299575|gb|AB007891|gb|CR749457
chr16:79636596-79636655
hs|16q23.2
Homo sapiens ATM interactor (ATMIN), mRNA [NM_015251]
GO:0005622(intracellular)|GO:0005634(nucleus)|GO:0006974(response to DNA damage stimulus)|GO:0008270(zinc ion binding)|GO:0046872(metal ion binding)
TGGACCTTCGTCAGCTTTGACACCTCTTTTCTGATTTAAAGACACCAAGGAAAACTACAA
A_23_P100141
A_23_P100141
FALSE
NM_023076 NM_023076 64718 UNKL
unkempt homolog (Drosophila)-like
Hs.643536
ENST00000402641
THC2474748
ref|NM_023076|gb|AK022685|gb|AK027013|ens|ENST00000402641
chr16:1355346-1355287
hs|16p13.3
Homo sapiens unkempt homolog (Drosophila)-like (UNKL), transcript variant 1, mRNA [NM_023076]
GO:0003676(nucleic acid binding)|GO:0005515(protein binding)|GO:0008270(zinc ion binding)|GO:0046872(metal ion binding)
AGCAGAGGGGATCCAACGTCAGAGCTTTTAGAATTACTTTTTTAAGCAGCTGTCTTCTGG
A_23_P100155
A_23_P100155
FALSE
NM_017849 NM_017849 55654 TMEM127
transmembrane protein 127
Hs.355708
ENST00000258439
THC2466683
ref|NM_017849|gb|BC028575|ens|ENST00000258439|gb|AK025910
chr2:96281851-96281792
hs|2q11.2
Homo sapiens transmembrane protein 127 (TMEM127), mRNA [NM_017849]
GO:0016020(membrane)|GO:0016021(integral to membrane)
AACCTGTCCTTGTTAAGTTACTTGCTTCTTGGGAATCAGTGTCCCCTGCTGAGCTGAAAA
A_23_P100177
A_23_P100177
FALSE
NM_002428 NM_002428 4324 MMP15
matrix metallopeptidase 15 (membrane-inserted)
Hs.80343
ENST00000219271
THC2739464
ref|NM_002428|gb|BC036495|ens|ENST00000219271|gb|CR596713
chr16:56637027-56637086
hs|16q13
Homo sapiens matrix metallopeptidase 15 (membrane-inserted) (MMP15), mRNA [NM_002428]
GO:0004222(metalloendopeptidase activity)|GO:0005509(calcium ion binding)|GO:0005515(protein binding)|GO:0005578(proteinaceous extracellular matrix)|GO:0005887(integral to plasma membrane)|GO:0006464(protein modification process)|GO:0006508(proteolysis)|GO:0008047(enzyme activator activity)|GO:0008152(metabolic process)|GO:0008233(peptidase activity)|GO:0008270(zinc ion binding)|GO:0016020(membrane)
GACCATTTGTTTCTGTTTCCCCGACTGGGGCAGGGTGTTTAGAATTTTCTAAATGTAGTT
A_23_P100189
A_23_P100189
FALSE
NM_002761 NM_002761 5619 PRM1
protamine 1
Hs.2909
ENST00000312511
THC2462590
ref|NM_002761|ens|ENST00000312511|gb|CR612045|gb|Y00443
chr16:11282363-11282304
hs|16p13.13
Homo sapiens protamine 1 (PRM1), mRNA [NM_002761]
GO:0000786(nucleosome)|GO:0003677(DNA binding)|GO:0005634(nucleus)|GO:0005654(nucleoplasm)|GO:0005694(chromosome)|GO:0006323(DNA packaging)|GO:0006997(nucleus organization)|GO:0007076(mitotic chromosome condensation)|GO:0007275(multicellular organismal development)|GO:0007283(spermatogenesis)|GO:0007286(spermatid development)|GO:0030154(cell differentiation)
GTAGAAGACACTAATTGCACAAAATAGCACATCCACCAAACTCCTGCCTGAGAATGTTAC
A_23_P100196
A_23_P100196
FALSE
NM_005153 NM_005153 9100 USP10
ubiquitin specific peptidase 10
Hs.136778
ENST00000219473
THC2470177
ref|NM_005153|gb|CR749515|ens|ENST00000219473|gb|BC000263
chr16:83370332-83370391
hs|16q24.1
Homo sapiens ubiquitin specific peptidase 10 (USP10), mRNA [NM_005153]
GO:0004221(ubiquitin thiolesterase activity)|GO:0006511(ubiquitin-dependent protein catabolic process)|GO:0008233(peptidase activity)|GO:0008234(cysteine-type peptidase activity)
TTGGGGTTCGTGCACAACACAGCTTCTGTTGACTCTAACTTCCAAATCAAAATCATTTGG
A_23_P100203
A_23_P100203
FALSE
NM_001537 NM_001537 3281 HSBP1
heat shock factor binding protein 1
Hs.250899
THC2465419
ref|NM_001537|gb|CR626052|gb|CR608180|gb|CR623333
chr16:82403745-82403804
hs|16q23.3
Homo sapiens heat shock factor binding protein 1 (HSBP1), mRNA [NM_001537]
GO:0000122(negative regulation of transcription from RNA polymerase II promoter)|GO:0003714(transcription corepressor activity)|GO:0005634(nucleus)
ACAAATTACATGGGGAACATAAAGGAGTGAGATCCTTCTGTGATAAAATGAATTCACCAC
20242 12166 Kbytes .Supplementary data files not provided
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