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Platform GPL7091 Query DataSets for GPL7091
Status Public on Jul 29, 2008
Title Agilent Human oligo 22k A
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent
Manufacture protocol Oligo Microarray Agilent 60 mers spotted.
Commercial spotting

Support glass
Coating unknown
 
Description array 22k spotted on 1 glass slide.
 
Web link http://www.agilent.com
Contributor(s) Desterke C
Submission date Jul 23, 2008
Last update date Jan 18, 2013
Contact name christophe desterke
E-mail(s) [email protected]
Phone +33 (0)145595316
Organization name university Paris Sud11
Department UFR medecine institute Andre Lwoff
Lab hopital Paul Brousse Batiment Lavoisier
Street address 14-16 avenue Paul Vaillant Couturier
City VILLEJUIF
ZIP/Postal code 94807
Country France
 
Samples (16) GSM307288, GSM307289, GSM307290, GSM307291, GSM307292, GSM307293 
Series (1)
GSE12234 Transcriptome Study of CD34+ hematopoietic progenitor from patients reached of Primary Myelofibrosis

Data table header descriptions
ID
PrimarySequenceName gene name
PT_ACC reference code gene
GB_ACC GenBank Accession number
ORF gene alias
Accession Agilent Accession Number
SequenceDescription description of gene fonction
SPOT_ID

Data table
ID PrimarySequenceName PT_ACC GB_ACC ORF Accession SequenceDescription SPOT_ID
1 LOC51235 Q9P0T7 LOC51235 I_930325 Protein of unknown function, has high similarity to uncharacterized human C11orf15
2 I_959282 BAB22881.1 I_959282 I_959282 Protein containing four leucine rich repeats, which mediate protein-protein interactions, has low similarity to a region of ERBB2 interacting protein (human LOC55914), which acts as an adaptor for the receptor ERBB2/HER2
3 FLJ13590 BAB14628.1 FLJ13590 I_960924 Protein of unknown function, has moderate similarity to uncharacterized human FLJ21941
4 NIT2 AAG44665.1 NIT2 I_928405 Member of the Nit and NitFhit branch of the nitrilase superfamily, may interact with FHIT, a tumor suppressor
5 I_1000540 BAA89208.1 I_1000540 I_1000540 Member of the DDT domain family, contains three PHD-fingers and a bromodomain, has a region of strong similarity to fetal Alzheimer antigen (human FALZ), which is a transcriptional repressor that inhibits transactivation by MAZ
6 KRT16 AAC99326.1 KRT16 I_1110002 Keratin 16, a type I keratin and component of intermediate filaments, contributes to cell shape and may be involved in cell proliferation, adhesion, migration, wound healing; gene mutation causes Pachyonychia congenita and Pachyonychia keratoderma
7 FLJ12542 BAB14123.1 FLJ12542 I_960319 Protein of unknown function
8 ZNF142 P52746 ZNF142 I_934085 Zinc finger protein 142, a putative transcription factor, member of the Kruppel zinc-finger protein family
9 NMP200 CAB51857.1 NMP200 I_931247 Protein containing six WD domains (WD-40 repeats), which may mediate protein-protein interactions, has weak similarity to non-snRNP spliceosome component (S. cerevisiae Prp19p), which is involved in mitotic recombination and gene conversion
10 DNAJB9 Q9UBS3 DNAJB9 I_930175 Microvascular endothelial differentiation gene 1, may be involved in angiogenesis and may be upregulated under stressful conditions
11 RBP3 P10745 RBP3 I_931431 Retinol binding protein 3, binds retinols, may bind fatty acids, synthesized by rod photoreceptor cells and secreted into the interphotoreceptor matrix
12 SIL AAK51418.1 SIL I_963120 TAL1 interrupting locus, may play a role in cell proliferation and lymphoid development; rearrangement of corresponding gene disrupts TAL1 expression and is associated with acute T-cell lymphoblastic leukemia
13 FLJ11240 CAC51151.1 FLJ11240 I_957650 Protein of unknown function
14 KIAA0150 BAA09771.1 KIAA0150 I_929968 Protein containing five CCCH-type zinc finger domains, which bind DNA or RNA, has a region of low similarity to cleavage and polyadenylation specific factor 4 30kD subunit (mouse Cpsf4), which is an RNase involved in RNA cleavage and polyadenylation
15 LOC64102 Q9H2S6 LOC64102 I_959014 Protein with moderate similarity to chondromodulin-I (mouse Lect1), which is involved in skeletal development and is a putative negative regulator of cell proliferation
16 DLGAP2 AAF34344.1 DLGAP2 I_929922 Protein of unknown function, has a region of high similarity to guanylate kinase-associated protein (rat Dlgap1), which is a synaptic protein that binds to the guanylate kinase-like domain of the PSD-95 family and may function in synapse organization
17 I_931356 BC010629.1 I_931356 I_931356 Protein of unknown function
18 I_1000440 AB002324.1 I_1000440 I_1000440 Protein containing 19 C2H2 type zinc finger domains, has a region of high similarity to human ZNF10, which inhibits some components of RNA polymerase II and III transcription
19 MICB AAB42011.1 MICB I_1109707 MHC class I polypeptide-related sequence B, a stress-induced member of the MIC (MHC class I chain-related) family, recognized by gut gamma delta T cells and may function in gut immunity
20 I_959992 CAC38599.1 I_959992 I_959992 Protein containing an RNA recognition motif (RRM, RBD, or RNP) and a SAP domain, which may bind DNA, has low similarity to human SAFB, which is a chromatin-associated DNA-binding protein implicated in organization of higher order chromatin structure

Total number of rows: 16391

Table truncated, full table size 3424 Kbytes.




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