GEO help: Mouse over screen elements for information.
Status
Public on Jul 02, 2020
Title
Illumina HorvathMammalianMethylChip40 BeadChip
Technology type
oligonucleotide beads
Distribution
custom-commercial
Organisms
Homo sapiens ; Mus musculus ; Rattus norvegicus Manufacturer
Illumina, Inc.
Manufacture protocol
See manufacturer's website
Description
Developed in the labs of Steve Horvath and Jason Ernst. The mammalian array platform applies to ALL mammals (humans, mouse, rat, sheep, horses, pigs, etc.).https://github.com/shorvath/MammalianMethylationConsortium/ https://bioconductor.org/packages/release/bioc/vignettes/sesame/inst/doc/mammal.html.
Web link
https://www.biorxiv.org/content/10.1101/2021.01.07.425637v2 Contributor(s)
Horvath S , Ernst J , Arneson A Submission date
Mar 15, 2020
Last update date
Aug 16, 2021
Contact name
Steve Horvath
E-mail(s)
[email protected] Organization name
University of California, Los Angeles
Department
Human Genetics
Lab
Horvath
Street address
695 Charles E. Young Drive South, Box 708822
City
Los Angeles
State/province
CA
ZIP/Postal code
90095-7088
Country
USA
Samples (22420)
GSM4411953 , GSM4411954 , GSM4411955 , GSM4411956 , GSM4411957 , GSM4411958
GSM4411959 ,
GSM4411960 ,
GSM4411961 ,
GSM4411962 ,
GSM4411963 ,
GSM4411964 ,
GSM4411965 ,
GSM4411966 ,
GSM4411967 ,
GSM4411968 ,
GSM4411969 ,
GSM4411970 ,
GSM4411971 ,
GSM4411972 ,
GSM4411973 ,
GSM4411974 ,
GSM4411975 ,
GSM4411976 ,
GSM4411977 ,
GSM4411978 ,
GSM4411979 ,
GSM4411980 ,
GSM4411981 ,
GSM4411982 ,
GSM4411983 ,
GSM4411984 ,
GSM4411985 ,
GSM4411986 ,
GSM4411987 ,
GSM4411988 ,
GSM4411989 ,
GSM4411990 ,
GSM4411991 ,
GSM4411992 ,
GSM4411993 ,
GSM4411994 ,
GSM4411995 ,
GSM4411996 ,
GSM4411997 ,
GSM4411998 ,
GSM4411999 ,
GSM4412000 ,
GSM4412001 ,
GSM4412002 ,
GSM4412003 ,
GSM4412004 ,
GSM4412005 ,
GSM4412006 ,
GSM4412007 ,
GSM4412008 ,
GSM4412009 ,
GSM4412010 ,
GSM4412011 ,
GSM4412012 ,
GSM4412013 ,
GSM4412014 ,
GSM4412015 ,
GSM4412016 ,
GSM4412017 ,
GSM4412018 ,
GSM4412019 ,
GSM4412020 ,
GSM4412021 ,
GSM4412022 ,
GSM4412023 ,
GSM4412024 ,
GSM4412025 ,
GSM4412026 ,
GSM4412027 ,
GSM4412028 ,
GSM4412029 ,
GSM4412030 ,
GSM4412031 ,
GSM4412032 ,
GSM4412033 ,
GSM4412034 ,
GSM4412035 ,
GSM4412036 ,
GSM4412037 ,
GSM4412038 ,
GSM4412039 ,
GSM4412040 ,
GSM4412041 ,
GSM4412042 ,
GSM4412043 ,
GSM4412044 ,
GSM4412045 ,
GSM4412046 ,
GSM4412047 ,
GSM4412048 ,
GSM4412049 ,
GSM4412050 ,
GSM4412051 ,
GSM4412052 ,
GSM4412053 ,
GSM4412054 ,
GSM4412055 ,
GSM4412056 ,
GSM4412057 ,
GSM4412058 ,
GSM4412059 ,
GSM4412060 ,
GSM4412061 ,
GSM4412062 ,
GSM4412063 ,
GSM4412064 ,
GSM4412065 ,
GSM4412066 ,
GSM4412067 ,
GSM4412068 ,
GSM4412069 ,
GSM4412070 ,
GSM4412071 ,
GSM4412072 ,
GSM4412073 ,
GSM4412074 ,
GSM4412075 ,
GSM4412076 ,
GSM4412077 ,
GSM4412078 ,
GSM4412079 ,
GSM4412080 ,
GSM4412081 ,
GSM4412082 ,
GSM4412083 ,
GSM4412084 ,
GSM4412085 ,
GSM4412086 ,
GSM4412087 ,
GSM4412088 ,
GSM4412089 ,
GSM4412090 ,
GSM4412091 ,
GSM4412092 ,
GSM4412093 ,
GSM4412094 ,
GSM4412095 ,
GSM4412096 ,
GSM4412097 ,
GSM4412098 ,
GSM4412099 ,
GSM4412100 ,
GSM4412101 ,
GSM4412102 ,
GSM4412103 ,
GSM4412104 ,
GSM4412105 ,
GSM4412106 ,
GSM4412107 ,
GSM4412108 ,
GSM4412109 ,
GSM4412110 ,
GSM4412111 ,
GSM4412112 ,
GSM4412113 ,
GSM4412114 ,
GSM4412115 ,
GSM4412116 ,
GSM4412117 ,
GSM4412118 ,
GSM4412119 ,
GSM4412120 ,
GSM4412121 ,
GSM4412122 ,
GSM4412123 ,
GSM4412124 ,
GSM4412125 ,
GSM4412126 ,
GSM4412127 ,
GSM4412128 ,
GSM4412129 ,
GSM4412130 ,
GSM4412131 ,
GSM4412132 ,
GSM4412133 ,
GSM4412134 ,
GSM4412135 ,
GSM4412136 ,
GSM4412137 ,
GSM4412138 ,
GSM4412139 ,
GSM4412140 ,
GSM4412141 ,
GSM4412142 ,
GSM4412143 ,
GSM4412144 ,
GSM4412145 ,
GSM4412146 ,
GSM4412147 ,
GSM4412148 ,
GSM4412149 ,
GSM4412150 ,
GSM4412151 ,
GSM4412152 ,
GSM4412153 ,
GSM4412154 ,
GSM4412155 ,
GSM4412156 ,
GSM4412157 ,
GSM4412158 ,
GSM4412159 ,
GSM4412160 ,
GSM4412161 ,
GSM4412162 ,
GSM4412163 ,
GSM4412164 ,
GSM4412165 ,
GSM4412166 ,
GSM4412167 ,
GSM4412168 ,
GSM4412169 ,
GSM4412170 ,
GSM4412171 ,
GSM4412172 ,
GSM4412173 ,
GSM4412174 ,
GSM4412175 ,
GSM4412176 ,
GSM4412177 ,
GSM4412178 ,
GSM4412179 ,
GSM4412180 ,
GSM4412181 ,
GSM4412182 ,
GSM4412183 ,
GSM4412184 ,
GSM4412185 ,
GSM4412186 ,
GSM4412187 ,
GSM4412188 ,
GSM4412189 ,
GSM4412190 ,
GSM4412191 ,
GSM4412192 ,
GSM4997095 ,
GSM4997096 ,
GSM4997097 ,
GSM4997098 ,
GSM4997099 ,
GSM4997100 ,
GSM4997101 ,
GSM4997102 ,
GSM4997103 ,
GSM4997104 ,
GSM4997105 ,
GSM4997106 ,
GSM4997107 ,
GSM4997108 ,
GSM4997109 ,
GSM4997110 ,
GSM4997111 ,
GSM4997112 ,
GSM4997113 ,
GSM4997114 ,
GSM4997115 ,
GSM4997116 ,
GSM4997117 ,
GSM4997118 ,
GSM4997119 ,
GSM4997120 ,
GSM4997121 ,
GSM4997122 ,
GSM4997123 ,
GSM4997124 ,
GSM4997125 ,
GSM4997126 ,
GSM4997127 ,
GSM4997128 ,
GSM4997129 ,
GSM4997130 ,
GSM4997131 ,
GSM4997132 ,
GSM4997133 ,
GSM4997134 ,
GSM4997135 ,
GSM4997136 ,
GSM4997137 ,
GSM4997138 ,
GSM4997139 ,
GSM4997140 ,
GSM4997141 ,
GSM4997142 ,
GSM4997143 ,
GSM4997144 ,
GSM4997145 ,
GSM4997146 ,
GSM4997147 ,
GSM4997148 ,
GSM4997149 ,
GSM4997150 ,
GSM4997151 ,
GSM4997152 ,
GSM4997153 ,
GSM4997154 ,
GSM4997155 ,
GSM4997156 ,
GSM4997157 ,
GSM4997158 ,
GSM4997159 ,
GSM4997160 ,
GSM4997161 ,
GSM4997162 ,
GSM4997163 ,
GSM4997164 ,
GSM4997165 ,
GSM4997166 ,
GSM4997167 ,
GSM4997168 ,
GSM4997169 ,
GSM4997170 ,
GSM4997171 ,
GSM4997172 ,
GSM4997173 ,
GSM4997174 ,
GSM4997175 ,
GSM4997176 ,
GSM4997177 ,
GSM4997178 ,
GSM4997179 ,
GSM4997180 ,
GSM4997181 ,
GSM4997182 ,
GSM4997183 ,
GSM4997184 ,
GSM4997185 ,
GSM4997186 ,
GSM4997187 ,
GSM4997188 ,
GSM4997189 ,
GSM4997190 ,
GSM4997191 ,
GSM4997192 ,
GSM4997193 ,
GSM4997194 ,
GSM4997195 ,
GSM4997196 ,
GSM4997197 ,
GSM4997198 ,
GSM4997199 ,
GSM4997200 ,
GSM4997201 ,
GSM4997202 ,
GSM4997203 ,
GSM4997204 ,
GSM4997205 ,
GSM4997206 ,
GSM4997207 ,
GSM4997208 ,
GSM4997209 ,
GSM4997210 ,
GSM4997211 ,
GSM4997212 ,
GSM4997213 ,
GSM4997214 ,
GSM4997215 ,
GSM4997216 ,
GSM4997217 ,
GSM4997218 ,
GSM4997219 ,
GSM4997220 ,
GSM4997221 ,
GSM4997222 ,
GSM4997223 ,
GSM4997224 ,
GSM4997225 ,
GSM4997226 ,
GSM4997227 ,
GSM4997228 ,
GSM4997229 ,
GSM4997230 ,
GSM4997231 ,
GSM4997232 ,
GSM4997233 ,
GSM4997234 ,
GSM4997235 ,
GSM4997236 ,
GSM4997237 ,
GSM4997238 ,
GSM4997239 ,
GSM4997240 ,
GSM4997241 ,
GSM4997242 ,
GSM4997243 ,
GSM4997244 ,
GSM4997245 ,
GSM4997246 ,
GSM4997247 ,
GSM4997248 ,
GSM4997249 ,
GSM4997250 ,
GSM4997251 ,
GSM4997252 ,
GSM4997253 ,
GSM4997254 ,
GSM4997255 ,
GSM4997256 ,
GSM4997257 ,
GSM4997258 ,
GSM4997259 ,
GSM4997260 ,
GSM4997261 ,
GSM4997262 ,
GSM4997263 ,
GSM4997264 ,
GSM4997265 ,
GSM4997266 ,
GSM4997267 ,
GSM4997268 ,
GSM4997269 ,
GSM4997270 ,
GSM4997271 ,
GSM4997272 ,
GSM4997273 ,
GSM4997274 ,
GSM4997275 ,
GSM4997276 ,
GSM4997277 ,
GSM4997278 ,
GSM4997279 ,
GSM4997280 ,
GSM4997281 ,
GSM4997282 ,
GSM4997283 ,
GSM4997284 ,
GSM4997285 ,
GSM4997286 ,
GSM4997287 ,
GSM4997288 ,
GSM4997289 ,
GSM4997290 ,
GSM4997291 ,
GSM4997292 ,
GSM4997293 ,
GSM4997294 ,
GSM4997295 ,
GSM4997296 ,
GSM4997297 ,
GSM4997298 ,
GSM4997299 ,
GSM4997300 ,
GSM4997301 ,
GSM4997302 ,
GSM4997303 ,
GSM4997304 ,
GSM4997305 ,
GSM4997306 ,
GSM4997307 ,
GSM4997308 ,
GSM4997309 ,
GSM4997310 ,
GSM4997311 ,
GSM4997312 ,
GSM4997313 ,
GSM4997314 ,
GSM4997315 ,
GSM4997316 ,
GSM4997317 ,
GSM4997318 ,
GSM4997319 ,
GSM4997320 ,
GSM4997321 ,
GSM4997322 ,
GSM4997323 ,
GSM4997324 ,
GSM4997325 ,
GSM4997326 ,
GSM4997327 ,
GSM4997328 ,
GSM4997329 ,
GSM4997330 ,
GSM4997331 ,
GSM4997332 ,
GSM4997333 ,
GSM4997334 ,
GSM4997335 ,
GSM4997336 ,
GSM4997337 ,
GSM4997338 ,
GSM4997339 ,
GSM4997340 ,
GSM4997341 ,
GSM4997342 ,
GSM4997343 ,
GSM4997344 ,
GSM4997345 ,
GSM4997346 ,
GSM4997347 ,
GSM4997348 ,
GSM4997349 ,
GSM4997350 ,
GSM4997351 ,
GSM4997352 ,
GSM4997353 ,
GSM4997354 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (49)
GSE147002 DNA methylation profiles from a mouse model of Huntington's disease
GSE147003 DNA methylation profiles from a transgenic sheep model of Huntington's disease
GSE147004 DNA Methylation Study of Huntington's Disease and Motor Progression in Three Species
GSE164127 Genome Methylation Predicts Age and Longevity of Bats
GSE164465 Genome Methylation in Wild Beluga Whales
GSE169218 Characterizing the properties of bisulfite sequencing data: maximizing power and sensitivity to identify differences in DNA methylation [Array]
GSE169235 Characterizing the properties of bisulfite sequencing data: maximizing power and sensitivity to identify differences in DNA methylation
GSE173330 Methylation clocks for age estimation in toothed whales and dolphins
GSE174544 Methylation studies in yellow-bellied marmots
GSE174567 Calibration data mammalian array: Human, Mouse, Rat
GSE174758 Methylation studies in prairie voles
GSE174767 Methylation studies in horses
GSE174777 Methylation studies in naked mole rat. Part 1
GSE174778 Methylation studies in mole rats. Part 2
GSE181732 Transposon-triggered innate immune response confers cancer resistance to the blind mole rat [array]
GSE181733 Transposon-triggered innate immune response confers cancer resistance to the blind mole rat
GSE184211 Methylation studies in multiple human tissues N16
GSE184213 Methylation studies in multiple human tissues N36
GSE184215 Methylation studies in multiple human tissues N47
GSE184216 Methylation studies in roe deer
GSE184218 Methylation studies in multiple human tissues N66
GSE184220 Methylation studies in human and mouse placenta
GSE184221 Methylation studies in human blood N94 N68
GSE184222 Methylation studies in wild ass and Grevy's zebra
GSE184223 Methylation studies in plains zebras
GSE184224 Methylation studies in human cells N76
GSE190660 Methylation studies in the vervet monkey
GSE190661 Methylation studies in baboons.
GSE190662 Methylation studies in strepsirrhini primates
GSE190663 Methylation studies in common marmoset
GSE190664 Methylation studies in rhesus macaque
GSE190665 In vivo partial reprogramming in 4F mice
GSE199979 Genetic Loci and Metabolic States Associated With Murine Epigenetic Aging
GSE223748 Mammalian Methylation Consortium
GSE224140 N87.Dataset
GSE224352 Longitudinal study of DNA methylation changes during mouse pregnancy
GSE224361 DNA methylation changes in mice induced by parabiosis and recovery [HorvathMammalMethylChip40]
GSE224447 DNA methylation and gene expression changes in mice induced by parabiosis and recovery
GSE225288 N57.Dataset
GSE225289 N14.Dataset
GSE227319 N27.Pinniped Dataset
GSE234154 Increased hyaluronan by naked mole-rat HAS2 extends healthspan in mice
GSE240833 Maternal oxytocin treatment at birth increases epigenetic age in male offspring [array]
GSE240856 Maternal oxytocin treatment at birth increases epigenetic age in male offspring
GSE242072 Epigenetic aging of Māui and Hector's dolphins
GSE246559 Methylomic signatures of tau and beta amyloid in transgenic mouse models of Alzheimer’s disease neuropathology [HorvathMammalMethylChip40 Methylation Beadchip]
GSE246561 Methylomic signatures of tau and beta amyloid in transgenic mouse models of Alzheimer’s disease neuropathology
GSE267903 Aged Mouse Muscle and Serum: Sedentary or Exercised Animals with or without Nicotinamide N-methyltransferase Inhibitor Treatment
GSE274777 Resistance to age-related hearing loss in the echolocating big brown bat (Eptesicus fuscus)
Data table header descriptions ID Illumina target ID (IlmnID)
Human.MAPINFO Illumina mapinfo location for humans
Human.CHR Human chromosome
Human.Strand Human strand
Design_Sequence Design sequence for the CpG
Forward_Sequence Forward sequence for the CpG
Top_Sequence Top sequence for the CpG
SourceSeq Source sequence
Infinium_Design_Type Infinium design type (probe type). Type I versus Type II probe.
Human.Hg19_CGstart Human.Hg19_CGend Human.Hg19_seqnames Human.Hg19_SYMBOL Human.Hg19_main_Categories Human.Hg38_start Human.Hg38_end Human.Hg38_seqnames Human.Hg38_SYMBOL Human.Hg38_main_Categories Mouse.GRCm38.100_CGstart Mouse.GRCm38.100_CGend Mouse.GRCm38.100_seqnames Mouse.GRCm38.100_SYMBOL Mouse.GRCm38.100_main_Categories Rat.Rnor.6.0.101_CGstart Rat.Rnor.6.0.101_CGend Rat.Rnor.6.0.101_seqnames Rat.Rnor.6.0.101_SYMBOL Rat.Rnor.6.0.101_main_Categories Horse.EquCab3.0.100_CGstart Horse.EquCab3.0.100_CGend Horse.EquCab3.0.100_seqnames Horse.EquCab3.0.100_SYMBOL Horse.EquCab3.0.100_main_Categories Pig.Sscrofa11.1.100_CGstart Pig.Sscrofa11.1.100_CGend Pig.Sscrofa11.1.100_seqnames Pig.Sscrofa11.1.100_SYMBOL Pig.Sscrofa11.1.100_main_Categories Cat.FC.9.0.100_CGstart Cat.FC.9.0.100_CGend Cat.FC.9.0.100_seqnames Cat.FC.9.0.100_SYMBOL Cat.FC.9.0.100_main_Categories Dog.CanFam3.1_CGstart Dog.CanFam3.1_CGend Dog.CanFam3.1_seqnames Dog.CanFam3.1_SYMBOL Dog.CanFam3.1_main_Categories Dolphine.turTru1.100_CGstart Dolphine.turTru1.100_CGend Dolphine.turTru1.100_seqnames Dolphine.turTru1.100_SYMBOL Dolphine.turTru1.100_main_Categories Elephant.loxAfr3.100_CGstart Elephant.loxAfr3.100_CGend Elephant.loxAfr3.100_seqnames Elephant.loxAfr3.100_SYMBOL Elephant.loxAfr3.100_main_Categories Cattle.ARS.UCD1.2_CGstart Cattle.ARS.UCD1.2_CGend Cattle.ARS.UCD1.2_seqnames Cattle.ARS.UCD1.2_SYMBOL Cattle.ARS.UCD1.2_main_Categories SPOT_ID
Data table ID Human.MAPINFO Human.CHR Human.Strand Design_Sequence Forward_Sequence Top_Sequence SourceSeq Infinium_Design_Type Human.Hg19_CGstart Human.Hg19_CGend Human.Hg19_seqnames Human.Hg19_SYMBOL Human.Hg19_main_Categories Human.Hg38_start Human.Hg38_end Human.Hg38_seqnames Human.Hg38_SYMBOL Human.Hg38_main_Categories Mouse.GRCm38.100_CGstart Mouse.GRCm38.100_CGend Mouse.GRCm38.100_seqnames Mouse.GRCm38.100_SYMBOL Mouse.GRCm38.100_main_Categories Rat.Rnor.6.0.101_CGstart Rat.Rnor.6.0.101_CGend Rat.Rnor.6.0.101_seqnames Rat.Rnor.6.0.101_SYMBOL Rat.Rnor.6.0.101_main_Categories Horse.EquCab3.0.100_CGstart Horse.EquCab3.0.100_CGend Horse.EquCab3.0.100_seqnames Horse.EquCab3.0.100_SYMBOL Horse.EquCab3.0.100_main_Categories Pig.Sscrofa11.1.100_CGstart Pig.Sscrofa11.1.100_CGend Pig.Sscrofa11.1.100_seqnames Pig.Sscrofa11.1.100_SYMBOL Pig.Sscrofa11.1.100_main_Categories Cat.FC.9.0.100_CGstart Cat.FC.9.0.100_CGend Cat.FC.9.0.100_seqnames Cat.FC.9.0.100_SYMBOL Cat.FC.9.0.100_main_Categories Dog.CanFam3.1_CGstart Dog.CanFam3.1_CGend Dog.CanFam3.1_seqnames Dog.CanFam3.1_SYMBOL Dog.CanFam3.1_main_Categories Dolphine.turTru1.100_CGstart Dolphine.turTru1.100_CGend Dolphine.turTru1.100_seqnames Dolphine.turTru1.100_SYMBOL Dolphine.turTru1.100_main_Categories Elephant.loxAfr3.100_CGstart Elephant.loxAfr3.100_CGend Elephant.loxAfr3.100_seqnames Elephant.loxAfr3.100_SYMBOL Elephant.loxAfr3.100_main_Categories Cattle.ARS.UCD1.2_CGstart Cattle.ARS.UCD1.2_CGend Cattle.ARS.UCD1.2_seqnames Cattle.ARS.UCD1.2_SYMBOL Cattle.ARS.UCD1.2_main_Categories SPOT_ID cg00000165
91194674
chr1
R
CATTTCAAAAGGGCAAAAGTCTTGGTCGTGAGCGTTCGGCCCCGGAGTCCATGCCACGGG[CG]ATGTGTGCCTCAGCTGTTCCATCAAAAGCCACTGTACTAACAGATCCTGACTGCACTTAG
CTAAGTGCAGTCAGGATCTGTTAGTACAGTGGCTTTTGATGGAACAGCTGAGGCACACAT[CG]CCCGTGGCATGGACTCCGGGGCCGAACGCTCACGACCAAGACTTTTGCCCTTTTGAAATG
CTAAGTGCAGTCAGGATCTGTTAGTACAGTGGCTTTTGATGGAACAGCTGAGGCACACAT[CG]CCCGTGGCATGGACTCCGGGGCCGAACGCTCACGACCAAGACTTTTGCCCTTTTGAAATG
AGGATCTGTTAGTACAGTGGCTTTTGATGGAACAGCTGAGGCACACATCG
II
91194674
91194675
chr1
BARHL2
Intergenic_upstream
90729117
90729118
chr1
BARHL2
Intergenic_upstream
NA
NA
NA
NA
NA
4348628
4348629
14
Barhl2
Intergenic_upstream
70662928
70662929
5
BARHL2
Intron
126018939
126018940
4
BARHL2
Promoter
77292873
77292874
C1
BARHL2
Intergenic_upstream
57959408
57959409
6
BARHL2
Intergenic_upstream
75712
75713
scaffold_98741
BARHL2
Intergenic_upstream
11412983
11412984
scaffold_60
BARHL2
Intergenic_upstream
52520158
52520159
3
BARHL2
Intergenic_upstream
cg00000165
cg00001209
61220029
chr5
F
TTTATCTTAGGAATTAATACATTCTGCCATTTTCTATTCTGGCTACAATCTAGAGAAATC[CG]TGAGGCTGAATACATTTTGTACCACTTTGTTCTGCTTATAATGTTAAGATGTTTTCAAGA
TTTATCTTAGGAATTAATACATTCTGCCATTTTCTATTCTGGCTACAATCTAGAGAAATC[CG]TGAGGCTGAATACATTTTGTACCACTTTGTTCTGCTTATAATGTTAAGATGTTTTCAAGA
TCTTGAAAACATCTTAACATTATAAGCAGAACAAAGTGGTACAAAATGTATTCAGCCTCA[CG]GATTTCTCTAGATTGTAGCCAGAATAGAAAATGGCAGAATGTATTAATTCCTAAGATAAA
CTTAACATTATAAGCAGAACAAAGTGGTACAAAATGTATTCAGCCTCACG
II
61220029
61220030
chr5
C5orf64
Intergenic_downstream
61924202
61924203
chr5
C5orf64-AS1
Intron
107337192
107337193
13
Gm2736
Intergenic_upstream
38574361
38574362
2
RGD1564606
Intergenic_downstream
11958495
11958496
21
KIF2A
Intron
40684563
40684564
16
KIF2A
Intergenic_upstream
131883869
131883870
A1
KIF2A
Intergenic_upstream
48380548
48380549
2
KIF2A
Intergenic_upstream
NA
NA
NA
NA
NA
64819638
64819639
scaffold_7
KIF2A
Intergenic_upstream
17450440
17450441
20
KIF2A
Intergenic_upstream
cg00001209
cg00001364
214170376
chr1
R
TGCCCCTTAATGCCACACTGGGGGAATGGCTCATACCCCGAATTATATTCTCAACCCGGG[CG]CGCTTTGCTCTCAGGTGCTCATCACATAAGCGATCCATATCAAACTGGCTCATAGTAGGC
GCCTACTATGAGCCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCG[CG]CCCGGGTTGAGAATATAATTCGGGGTATGAGCCATTCCCCCAGTGTGGCATTAAGGGGCA
GCCTACTATGAGCCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCG[CG]CCCGGGTTGAGAATATAATTCGGGGTATGAGCCATTCCCCCAGTGTGGCATTAAGGGGCA
CCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCGCG
II
214170376
214170377
chr1
PROX1
Exon
213997033
213997034
chr1
PROX1
Exon
190161748
190161749
1
Prox1
Exon
108391779
108391780
13
Prox1
Exon
22129005
22129006
5
PROX1
Exon
129572075
129572076
9
PROX1
Exon
31678384
31678385
F1
PROX1
Exon
12005293
12005294
7
PROX1
Exon
366695
366696
scaffold_109953
PROX1
Exon
1266053
1266054
scaffold_74
PROX1
Exon
69576644
69576645
16
PROX1
Exon
cg00001364
cg00001582
80828702
chr10
R
CAGACAGTGAAAAGGAACTCGGCGTTAGGGGGTGAGTAAGTGAATCAACTCGCCCGGAGC[CG]AGCAAGTTGAAGTGTCAGATTACATTGGCTATTCTATTTCCAAAGGGCCCCGCGCCGCCG
CGGCGGCGCGGGGCCCTTTGGAAATAGAATAGCCAATGTAATCTGACACTTCAACTTGCT[CG]GCTCCGGGCGAGTTGATTCACTTACTCACCCCCTAACGCCGAGTTCCTTTTCACTGTCTG
CGGCGGCGCGGGGCCCTTTGGAAATAGAATAGCCAATGTAATCTGACACTTCAACTTGCT[CG]GCTCCGGGCGAGTTGATTCACTTACTCACCCCCTAACGCCGAGTTCCTTTTCACTGTCTG
GCCCTTTGGAAATAGAATAGCCAATGTAATCTGACACTTCAACTTGCTCG
II
80828702
80828703
chr10
ZMIZ1
Promoter
79068945
79068946
chr10
ZMIZ1
Promoter
25459229
25459230
14
Zmiz1
fiveUTR
1749197
1749198
16
Zmiz1
fiveUTR
66604091
66604092
1
ZMIZ1
Intron
81407175
81407176
14
ZMIZ1
Intron
41104169
41104170
D2
ZMIZ1
Intergenic_upstream
28807190
28807191
4
ZMIZ1
Intergenic_upstream
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
34702943
34702944
28
ZMIZ1
Intergenic_upstream
cg00001582
cg00002920
130336474
chr10
R
AATGCAGCTTGCGCCAGCCACATCTGTGTCTTCCTCTTCTGCCCTCCAAATGAGCCACGC[CG]AGGCAGGGAAGCTGTTGACAAATTAATACTTTAAGAAAATAAACTATGGTCATGTTCAAC
GTTGAACATGACCATAGTTTATTTTCTTAAAGTATTAATTTGTCAACAGCTTCCCTGCCT[CG]GCGTGGCTCATTTGGAGGGCAGAAGAGGAAGACACAGATGTGGCTGGCGCAAGCTGCATT
GTTGAACATGACCATAGTTTATTTTCTTAAAGTATTAATTTGTCAACAGCTTCCCTGCCT[CG]GCGTGGCTCATTTGGAGGGCAGAAGAGGAAGACACAGATGTGGCTGGCGCAAGCTGCATT
CATAGTTTATTTTCTTAAAGTATTAATTTGTCAACAGCTTCCCTGCCTCG
II
130336474
130336475
chr10
MKI67
Intergenic_upstream
128538210
128538211
chr10
LINC01163
Intergenic_downstream
136057382
136057383
7
Gm9341
Intergenic_downstream
NA
NA
NA
NA
NA
4965237
4965238
1
MKI67
Intergenic_upstream
137626929
137626930
14
PTPRE
Intergenic_downstream
NA
NA
NA
NA
NA
37277271
37277272
28
MKI67
Intergenic_upstream
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
47915351
47915352
26
MKI67
Intergenic_upstream
cg00002920
cg00003994
15725862
chr7
R
TATGTCTTACCCCGAGCTCTCTACTTCTTCCTCATCTTGCATAATCGCGGGATACCCCAA[CG]AAGAGGGCATGTTTGCCAGCCAGCATCACAGGGGGCACCACCACCACCACCACCACCACC
GGTGGTGGTGGTGGTGGTGGTGGTGCCCCCTGTGATGCTGGCTGGCAAACATGCCCTCTT[CG]TTGGGGTATCCCGCGATTATGCAAGATGAGGAAGAAGTAGAGAGCTCGGGGTAAGACATA
GGTGGTGGTGGTGGTGGTGGTGGTGCCCCCTGTGATGCTGGCTGGCAAACATGCCCTCTT[CG]TTGGGGTATCCCGCGATTATGCAAGATGAGGAAGAAGTAGAGAGCTCGGGGTAAGACATA
GGTGGTGGTGGTGCCCCCTGTGATGCTGGCTGGCAAACATGCCCTCTTCG
II
15725862
15725863
chr7
MEOX2
Exon
15686237
15686238
chr7
MEOX2
Exon
37108995
37108996
12
Meox2
Exon
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
85009771
85009772
9
MEOX2
Exon
110232429
110232430
A2
AGMO
Exon
30323833
30323834
14
AGMO
Exon
100073
100074
scaffold_113192
MEOX2
Exon
43078275
43078276
scaffold_5
MEOX2
Exon
24074737
24074738
4
MEOX2
Exon
cg00003994
cg00004555
9441696
chr3
R
CTTAGTCCTGAAGCAGCCATCGCCTAAGTGCTGCTCCCTGCAGCCAGCAGCATTAATGGA[CG]CTGCACTGCTGTCCTTCCCTGGAGACAGCAGCCAGCACTACTCAAGCTTCTCACGTAGCA
TGCTACGTGAGAAGCTTGAGTAGTGCTGGCTGCTGTCTCCAGGGAAGGACAGCAGTGCAG[CG]TCCATTAATGCTGCTGGCTGCAGGGAGCAGCACTTAGGCGATGGCTGCTTCAGGACTAAG
CTTAGTCCTGAAGCAGCCATCGCCTAAGTGCTGCTCCCTGCAGCCAGCAGCATTAATGGA[CG]CTGCACTGCTGTCCTTCCCTGGAGACAGCAGCCAGCACTACTCAAGCTTCTCACGTAGCA
CGCTGCACTGCTGTCCTTCCCTGGAGACAGCAGCCAGCACTACTCAAGCT
II
9441696
9441697
chr3
SETD5
Intron
9400012
9400013
chr3
SETD5
Intron
113079710
113079711
6
Setd5
Intron
145019906
145019907
4
Setd5
Intron
8818814
8818815
16
SETD5
Intergenic_upstream
65762351
65762352
13
SETD5
Intron
50770587
50770588
A2
SETD5
Intron
8763626
8763627
20
SETD5
Intergenic_upstream
322939
322940
GeneScaffold_3269
SETD5
Intergenic_upstream
37488099
37488100
scaffold_12
SETD5
Intergenic_upstream
17207236
17207237
22
SETD5
Intergenic_upstream
cg00004555
cg00005112
69958840
chr16
F
GGTTGGGGGGGACGCCGAGGTGGAGGGAGGAGGGCCGGGCCCCAGCCAGGAAGCTCTGGG[CG]TGGGCAGGGCTTGTGGGAATGATTTCATTGGAAAGGCCTGCGATATTTTTTCCCCTCCTG
GGTTGGGGGGGACGCCGAGGTGGAGGGAGGAGGGCCGGGCCCCAGCCAGGAAGCTCTGGG[CG]TGGGCAGGGCTTGTGGGAATGATTTCATTGGAAAGGCCTGCGATATTTTTTCCCCTCCTG
CAGGAGGGGAAAAAATATCGCAGGCCTTTCCAATGAAATCATTCCCACAAGCCCTGCCCA[CG]CCCAGAGCTTCCTGGCTGGGGCCCGGCCCTCCTCCCTCCACCTCGGCGTCCCCCCCAACC
AAATATCGCAGGCCTTTCCAATGAAATCATTCCCACAAGCCCTGCCCACG
II
69958840
69958841
chr16
WWP2
Intron
69924937
69924938
chr16
WWP2
Intron
107544964
107544965
8
Wwp2
fiveUTR
39602642
39602643
19
Wwp2
Intron
20594598
20594599
3
WWP2
Intron
17084736
17084737
6
WWP2
Intron
47289919
47289920
E2
WWP2
Intron
79821063
79821064
5
WWP2
Intron
134124
134125
GeneScaffold_3381
WWP2
Intron
11181392
11181393
scaffold_48
WWP2
Intron
36954854
36954855
18
WWP2
Intron
cg00005112
cg00005271
47753780
chr11
R
TCCAGAGTGTTGCACGGAGTAGGGCGGGCTTGGGGGTTAAGCGCATGCGAGAGCTCTGTG[CG]CTTTACAGGACCTCTGGAAGCAACTACTCCTGATTAACCTCGGTGAAGTTAAGGAAAACT
AGTTTTCCTTAACTTCACCGAGGTTAATCAGGAGTAGTTGCTTCCAGAGGTCCTGTAAAG[CG]CACAGAGCTCTCGCATGCGCTTAACCCCCAAGCCCGCCCTACTCCGTGCAACACTCTGGA
AGTTTTCCTTAACTTCACCGAGGTTAATCAGGAGTAGTTGCTTCCAGAGGTCCTGTAAAG[CG]CACAGAGCTCTCGCATGCGCTTAACCCCCAAGCCCGCCCTACTCCGTGCAACACTCTGGA
CTTCACCGAGGTTAATCAGGAGTAGTTGCTTCCAGAGGTCCTGTAAAGCG
II
47753780
47753781
chr11
FNBP4
Exon
47732180
47732229
chr11
FNBP4
Exon
90767843
90767844
2
Fnbp4
Exon
79597447
79597448
3
Fnbp4
Intron
12127766
12127767
12
FNBP4
Intron
14914485
14914486
2
FNBP4
Intron
101673339
101673340
D1
FNBP4
Intron
41937678
41937679
18
FNBP4
Intron
73377
73378
GeneScaffold_2458
FNBP4
Intron
1804894
1804895
scaffold_21
FNBP4
Intron
77499228
77499229
15
FNBP4
Intron
cg00005271
cg00006213
35646820
chr1
R
TAGTGGCCTGCTACATAACTGCATTTAGCCAGCATTTCTGCAGTGCGTAACTGTGAGGAA[CG]TAGTACCGCAAATGGCAATGGACATTAGGACCCGGATGTAGTATTCCTGCTTGCTCCAAG
CTTGGAGCAAGCAGGAATACTACATCCGGGTCCTAATGTCCATTGCCATTTGCGGTACTA[CG]TTCCTCACAGTTACGCACTGCAGAAATGCTGGCTAAATGCAGTTATGTAGCAGGCCACTA
CTTGGAGCAAGCAGGAATACTACATCCGGGTCCTAATGTCCATTGCCATTTGCGGTACTA[CG]TTCCTCACAGTTACGCACTGCAGAAATGCTGGCTAAATGCAGTTATGTAGCAGGCCACTA
AGGAATACTACATCCGGGTCCTAATGTCCATTGCCATTTGCGGTACTACG
II
35646820
35646821
chr1
SFPQ
Intergenic_downstream
35181219
35181220
chr1
SFPQ
Exon
127032720
127032721
4
Sfpq
Intron
145090944
145090945
5
Sfpq
Intergenic_downstream
22127082
22127083
2
SFPQ
Intron
91397875
91397876
6
SFPQ
Intron
27062520
27062521
C1
SFPQ
Intron
6890933
6890934
15
SFPQ
Intergenic_downstream
NA
NA
NA
NA
NA
14191845
14191846
scaffold_34
SFPQ
Intergenic_downstream
110568256
110568257
3
SFPQ
Intron
cg00006213
cg00008998
144443484
chr2
R
TCTTTTCCAGCTAACATAATTTTTTTTTTAAAGTAAACATCAGCTTCTCAAGAGAGATTT[CG]ATTTGAAGACTGTTTATTATATCATTTGAATAGGACTAGACCTGGCCTTTTGACTTTGAA
TTCAAAGTCAAAAGGCCAGGTCTAGTCCTATTCAAATGATATAATAAACAGTCTTCAAAT[CG]AAATCTCTCTTGAGAAGCTGATGTTTACTTTAAAAAAAAAATTATGTTAGCTGGAAAAGA
TTCAAAGTCAAAAGGCCAGGTCTAGTCCTATTCAAATGATATAATAAACAGTCTTCAAAT[CG]AAATCTCTCTTGAGAAGCTGATGTTTACTTTAAAAAAAAAATTATGTTAGCTGGAAAAGA
AGGCCAGGTCTAGTCCTATTCAAATGATATAATAAACAGTCTTCAAATCG
II
144443484
144443485
chr2
ARHGAP15
Intron
143685915
143685916
chr2
ARHGAP15
Intron
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
26727904
26727905
18
ARHGAP15
Intron
8269740
8269741
15
ARHGAP15
Intron
137175869
137175870
C1
ARHGAP15
Intron
45738195
45738196
19
ARHGAP15
Intron
789104
789105
GeneScaffold_926
ARHGAP15
Intron
NA
NA
NA
NA
NA
53045960
53045961
2
ARHGAP15
Intron
cg00008998
cg00009248
44087711
chr17
R
TCACACTGCCGCCTCCCGGGACGTGTTTGATATTATCCTTTGAGCCACACTTGGACTGGA[CG]TTGCTAAGATCCAGCTTCTTATTAATTATCTGCACCTTTGGTAGCCAGAAAAAAGGATGA
TCATCCTTTTTTCTGGCTACCAAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAA[CG]TCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGA
TCATCCTTTTTTCTGGCTACCAAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAA[CG]TCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGA
CTGGCTACCAAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACG
II
44087711
44087712
chr17
MAPT
Exon
46010297
46010346
chr17
MAPT
Exon
104318192
104318193
11
Mapt
Exon
92374198
92374199
10
Mapt
Exon
17640689
17640690
11
MAPT
Exon
17112263
17112264
12
MAPT
Exon
46093961
46093962
E1
MAPT
Exon
9581006
9581007
9
MAPT
Exon
318836
318837
GeneScaffold_2739
MAPT
Exon
27421915
27421916
scaffold_31
MAPT
Exon
45993499
45993500
19
MAPT
Exon
cg00009248
cg00009319
70096026
chr7
F
TTTTTTTTGAGCGTACTTTAATGAAGAAGATAAAGCGGCCCGGCTGGTGTCCCACAGGCT[CG]GCGCAGTAAGTTCAGATTATTGCTCAGTCTGTCAGAATGGGCTGCTTCCCTCAGCAGCAG
TTTTTTTTGAGCGTACTTTAATGAAGAAGATAAAGCGGCCCGGCTGGTGTCCCACAGGCT[CG]GCGCAGTAAGTTCAGATTATTGCTCAGTCTGTCAGAATGGGCTGCTTCCCTCAGCAGCAG
TTTTTTTTGAGCGTACTTTAATGAAGAAGATAAAGCGGCCCGGCTGGTGTCCCACAGGCT[CG]GCGCAGTAAGTTCAGATTATTGCTCAGTCTGTCAGAATGGGCTGCTTCCCTCAGCAGCAG
CGGCGCAGTAAGTTCAGATTATTGCTCAGTCTGTCAGAATGGGCTGCTTC
II
70096026
70096027
chr7
AUTS2
Intron
70631040
70631041
chr7
AUTS2
Intron
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
16516491
16516492
13
AUTS2
Intron
14637435
14637436
3
AUTS2
Intron
13879325
13879326
E3
AUTS2
Intron
2893111
2893112
6
AUTS2
Intron
NA
NA
NA
NA
NA
13154044
13154045
scaffold_45
AUTS2
Intergenic_upstream
29952107
29952108
25
AUTS2
Intergenic_upstream
cg00009319
cg00010445
14089630
chr19
R
CCTGCCGCAGCAGAAAGTGGTCTTCGAGCCACTGTCCCGGCTCCCGGCCCGAGCCAGCCC[CG]ACCAGAGGGTCAGGATCCAGAGAATCCCCCAGGTGCTAGTGTTCGGCACGGCCGCCACGG
CCGTGGCGGCCGTGCCGAACACTAGCACCTGGGGGATTCTCTGGATCCTGACCCTCTGGT[CG]GGGCTGGCTCGGGCCGGGAGCCGGGACAGTGGCTCGAAGACCACTTTCTGCTGCGGCAGG
CCGTGGCGGCCGTGCCGAACACTAGCACCTGGGGGATTCTCTGGATCCTGACCCTCTGGT[CG]GGGCTGGCTCGGGCCGGGAGCCGGGACAGTGGCTCGAAGACCACTTTCTGCTGCGGCAGG
TGCCGAACACTAGCACCTGGGGGATTCTCTGGATCCTGACCCTCTGGTCG
II
14089630
14089631
chr19
RFX1
Intron
13978818
13978819
chr19
RFX1
Intron
84084835
84084836
8
Rfx1
Intron
NA
NA
NA
NA
NA
46136980
46136981
7
RFX1
Exon
65193103
65193104
2
RFX1
Exon
9935143
9935144
A2
RFX1
Exon
NA
NA
NA
NA
NA
94109
94110
GeneScaffold_3209
RFX1
Intron
NA
NA
NA
NA
NA
11712260
11712261
7
RFX1
Intron
cg00010445
cg00010903
37421663
chr17
F
TTTGATTAAACCCAGTAAACACATAAAGTTTTCAAAGTTAAACTCACCAATACTTGAAGT[CG]AGGACAGTGTATAGAAAGTTGGATTAATGTGCTATCTGTTATCTGAAAGAAATAACGTAT
TTTGATTAAACCCAGTAAACACATAAAGTTTTCAAAGTTAAACTCACCAATACTTGAAGT[CG]AGGACAGTGTATAGAAAGTTGGATTAATGTGCTATCTGTTATCTGAAAGAAATAACGTAT
TTTGATTAAACCCAGTAAACACATAAAGTTTTCAAAGTTAAACTCACCAATACTTGAAGT[CG]AGGACAGTGTATAGAAAGTTGGATTAATGTGCTATCTGTTATCTGAAAGAAATAACGTAT
CGAGGACAGTGTATAGAAAGTTGGATTAATGTGCTATCTGTTATCTGAAA
II
37421663
37421664
chr17
FBXL20
Exon
39265410
39265411
chr17
FBXL20
Exon
NA
NA
NA
NA
NA
86045955
86045956
10
Fbxl20
Exon
23091390
23091391
11
FBXL20
Exon
22962500
22962501
12
FBXL20
Exon
40459168
40459169
E1
FBXL20
Exon
23118173
23118174
9
FBXL20
Exon
40612
40613
GeneScaffold_738
FBXL20
Exon
21494317
21494318
scaffold_31
FBXL20
Exon
39746795
39746796
19
FBXL20
Exon
cg00010903
cg00010926
110388123
chrX
F
GCCATTTTTGTCCCAAATACTTCAGAACTCCCCTTTCCAGACCTCTAGACCTGTGACGGT[CG]CTTCAAGTCAATCAGAGGGAAAAATGGTATGAGTGATATAAATTATCATTTCTTATGATA
GCCATTTTTGTCCCAAATACTTCAGAACTCCCCTTTCCAGACCTCTAGACCTGTGACGGT[CG]CTTCAAGTCAATCAGAGGGAAAAATGGTATGAGTGATATAAATTATCATTTCTTATGATA
GCCATTTTTGTCCCAAATACTTCAGAACTCCCCTTTCCAGACCTCTAGACCTGTGACGGT[CG]CTTCAAGTCAATCAGAGGGAAAAATGGTATGAGTGATATAAATTATCATTTCTTATGATA
CGCTTCAAGTCAATCAGAGGGAAAAATGGTATGAGTGATATAAATTATCA
II
110388123
110388124
chrX
PAK3
Exon
111144895
111144896
chrX
PAK3
Exon
143712313
143712314
X
Pak3
Exon
114974744
114974745
X
Pak3
Intron
91951485
91951486
X
PAK3
Exon
91169692
91169693
X
PAK3
Exon
93233046
93233047
X
PAK3
Exon
84261292
84261293
X
PAK3
Exon
511899
511900
GeneScaffold_555
PAK3
Exon
20281949
20281950
scaffold_32
PAK3
Intron
59320935
59320936
X
PAK3
Exon
cg00010926
cg00010977
164301322
chr2
R
TTTGCAGCCAAAAGCTTTTTTTCTCTTGAAATGTTAATAACTTTCTATTAGTTAATGTAG[CG]TGACTAAAATTCAGATTAGATATAATTCATTTTAATATCTGTGACTGGCTATCCTGATCA
TGATCAGGATAGCCAGTCACAGATATTAAAATGAATTATATCTAATCTGAATTTTAGTCA[CG]CTACATTAACTAATAGAAAGTTATTAACATTTCAAGAGAAAAAAAGCTTTTGGCTGCAAA
TGATCAGGATAGCCAGTCACAGATATTAAAATGAATTATATCTAATCTGAATTTTAGTCA[CG]CTACATTAACTAATAGAAAGTTATTAACATTTCAAGAGAAAAAAAGCTTTTGGCTGCAAA
CCAGTCACAGATATTAAAATGAATTATATCTAATCTGAATTTTAGTCACG
II
164301322
164301323
chr2
FIGN
Intergenic_downstream
163444812
163444813
chr2
FIGN
Intergenic_downstream
63820144
63820145
2
Fign
Intergenic_downstream
49826222
49826223
3
Fign
Intergenic_downstream
43767453
43767454
18
FIGN
Intron
70111981
70111982
15
FIGN
Intergenic_downstream
155203907
155203908
C1
FIGN
Intergenic_downstream
8778111
8778112
36
FIGN
Intergenic_downstream
199920
199921
scaffold_102743
FIGN
Intergenic_downstream
64165311
64165312
scaffold_3
FIGN
Intergenic_downstream
32915411
32915412
2
FIGN
Intergenic_downstream
cg00010977
cg00012521
30540210
chr7
R
CCAAGGCAAAACAAGTCAAACTTGGCATGGAGGGATAGCCACCATTTTTCAGAGTCCTGG[CG]ATGAAGTGTGGGGAGTAGTATGGAAAATGAACAAAAGCAATTTAAATTCTCTGGATGAGT
ACTCATCCAGAGAATTTAAATTGCTTTTGTTCATTTTCCATACTACTCCCCACACTTCAT[CG]CCAGGACTCTGAAAAATGGTGGCTATCCCTCCATGCCAAGTTTGACTTGTTTTGCCTTGG
ACTCATCCAGAGAATTTAAATTGCTTTTGTTCATTTTCCATACTACTCCCCACACTTCAT[CG]CCAGGACTCTGAAAAATGGTGGCTATCCCTCCATGCCAAGTTTGACTTGTTTTGCCTTGG
AATTTAAATTGCTTTTGTTCATTTTCCATACTACTCCCCACACTTCATCG
II
30540210
30540211
chr7
GGCT
Exon
30500594
30500595
chr7
GGCT
fiveUTR
54989470
54989471
6
Ggct
Exon
85189433
85189434
4
Ggct
Exon
61222667
61222668
4
NOD1
Exon
42415044
42415045
18
NOD1
Exon
123618569
123618570
A2
NOD1
Exon
NA
NA
NA
NA
NA
259170
259171
GeneScaffold_2975
GGCT
Exon
NA
NA
NA
NA
NA
65813303
65813304
4
GGCT
Exon
cg00012521
cg00012879
13189496
chr19
F
CTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTCAGGGCAGCTCCC[CG]CGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGTGAGAAA
CTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTCAGGGCAGCTCCC[CG]CGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGTGAGAAA
TTTCTCACCTGGTCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCG[CG]GGGAGCTGCCCTGAGAGGAGAGGGCACTGCAGAAGTCCAGCTTTCCTGACTTCTTTAGAG
TCTGACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGCG
II
13189496
13189497
chr19
NFIX
Exon
13078682
13078683
chr19
NFIX
threeUTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
46676488
46676489
7
NFIX
Exon
65975121
65975122
2
NFIX
Exon
9330417
9330418
A2
NFIX
Exon
49133732
49133733
20
NFIX
Exon
108962
108963
GeneScaffold_2951
NFIX
Exon
30062477
30062478
scaffold_26
TRMT1
Exon
12496634
12496635
7
NFIX
Exon
cg00012879
cg00013189
101296898
chr10
R
TCTTTCCGCACCTTCCCGGCCCGGAGCCGCCTTTCAGCGAGGCCCGGCCCCACAATGGCG[CG]GCGCTCTGAGGCCTCCCCATTCACCCGCCTTGGCACGCTCACAATCGGCCGTGTGGCAGC
GCTGCCACACGGCCGATTGTGAGCGTGCCAAGGCGGGTGAATGGGGAGGCCTCAGAGCGC[CG]CGCCATTGTGGGGCCGGGCCTCGCTGAAAGGCGGCTCCGGGCCGGGAAGGTGCGGAAAGA
TCTTTCCGCACCTTCCCGGCCCGGAGCCGCCTTTCAGCGAGGCCCGGCCCCACAATGGCG[CG]GCGCTCTGAGGCCTCCCCATTCACCCGCCTTGGCACGCTCACAATCGGCCGTGTGGCAGC
CGGCGCTCTGAGGCCTCCCCATTCACCCGCCTTGGCACGCTCACAATCGG
I
101296898
101296899
chr10
NKX2-3
Intergenic_downstream
99537141
99537142
chr10
NKX2-3
Intergenic_downstream
43616541
43616542
19
Nkx2-3
Intergenic_downstream
263371259
263371260
1
Nkx2-3
Intergenic_downstream
30287655
30287656
1
NKX2-3
Intergenic_downstream
110724603
110724604
14
NKX2-3
Intergenic_downstream
60442419
60442420
D2
NKX2-3
Intergenic_downstream
12470310
12470311
28
NKX2-3
Intergenic_downstream
198164
198165
GeneScaffold_1035
NKX2-3
Intergenic_downstream
18699148
18699149
scaffold_10
NKX2-3
Intergenic_downstream
20534974
20534975
26
NKX2-3
Intergenic_downstream
cg00013189
37554 31226 Kbytes .Supplementary data files not provided
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