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Platform GPL16082 Query DataSets for GPL16082
Status Public on Dec 04, 2013
Title Agilent-035137 Catostomus snyderi array [Probe Name]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Catostomus snyderi
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description This is the Probe Name version of GPL15985 [Feature Number version]
Arrays of this design have barcodes that begin with 16035137 or 2535137.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
 
Submission date Sep 19, 2012
Last update date Feb 22, 2013
Contact name Alvine C Mehinto
Organization name Southern California Coastal Water Research Project
Lab Center for Envirom & Human Toxicol
Street address 3535 Harbor Blvd, Suite 110
City Costa Mesa
ZIP/Postal code 92626
Country USA
 
Samples (21) GSM1006808, GSM1006809, GSM1006810, GSM1006811, GSM1006812, GSM1006813 
Series (1)
GSE41016 Microarray analysis of gene response to contaminant accumulation in wild largescale suckers
Relations
Alternative to GPL15985

Data table header descriptions
ID PROBE NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
SEQUENCE Sequence

Data table
ID SPOT_ID CONTROL_TYPE ACCESSION_STRING CHROMOSOMAL_LOCATION SEQUENCE
(+)E1A_r60_1 (+)E1A_r60_1 pos
(+)E1A_r60_3 (+)E1A_r60_3 pos
(+)E1A_r60_a104 (+)E1A_r60_a104 pos
(+)E1A_r60_a107 (+)E1A_r60_a107 pos
(+)E1A_r60_a135 (+)E1A_r60_a135 pos
(+)E1A_r60_a20 (+)E1A_r60_a20 pos
(+)E1A_r60_a22 (+)E1A_r60_a22 pos
(+)E1A_r60_a97 (+)E1A_r60_a97 pos
(+)E1A_r60_n11 (+)E1A_r60_n11 pos
(+)E1A_r60_n9 (+)E1A_r60_n9 pos
(+)eQC-39 (+)eQC-39 pos
(+)eQC-40 (+)eQC-40 pos
(+)eQC-41 (+)eQC-41 pos
(+)eQC-42 (+)eQC-42 pos
(-)3xSLv1 (-)3xSLv1 neg
DCP_1_0 DCP_1_0 pos
DCP_1_1 DCP_1_1 pos
DCP_1_11 DCP_1_11 pos
DCP_1_2 DCP_1_2 pos
DCP_1_4 DCP_1_4 pos

Total number of rows: 14818

Table truncated, full table size 2029 Kbytes.




Download family Format
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Supplementary data files not provided
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